PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03408.1.g00010.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 303aa    MW: 32123.9 Da    PI: 7.1839
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03408.1.g00010.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like45.61.5e-141471752755
                       G2-like  27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   AtPk++lelm+ k+Ltl+hvkSHLQ+YR+
  Zpz_sc03408.1.g00010.1.sm.mk 147 ATPKSVLELMDGKDLTLAHVKSHLQMYRT 175
                                   9***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.2E-5145176IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-11146175IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.607.7E-13146176IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MEFFPSQPDL SLQIGLSTSA PPHDRHHHHH AAAAFNARFF AAGGGAGNGG LVGSAGTMAP  60
SSLQQPGAMP MPLPLPLPVP MHPGAAGHQG GGLYYHPDGS AAVLRPIRGV PLYQHHPQHA  120
VAGPCFCEPC HVAGAWRRAG ARPLPWATPK SVLELMDGKD LTLAHVKSHL QMYRTVKNTE  180
RPAASSDQAD GFEKGAAGEI CDDNSLDLQG AYSGGGGRPE TAARHGSYSS LRLVHREDWT  240
GFPSESSTGS IHSLKDRQMQ SKSLEILSDM NSSCVSETTT SSTSVDLNLD FTLGRPHQTQ  300
RPN
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03408.1.g00010.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9570082e-68EU957008.1 Zea mays clone 1580405 KANADI-like transcription factor FEATHERED mRNA, complete cds.
GenBankKJ7268192e-68KJ726819.1 Zea mays clone pUT3358 G2-like transcription factor (GLK55) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008661896.17e-96KANADI-like transcription factor FEATHERED isoform X1
TrEMBLA0A3L6PS852e-98A0A3L6PS85_PANMI; Putative transcription factor RL9 isoform X1
STRINGLPERR08G03610.15e-94(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47213665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.19e-20G2-like family protein