PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc03274.1.g00010.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GRAS | ||||||||
Protein Properties | Length: 73aa MW: 8232.69 Da PI: 9.8625 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 23.3 | 7.3e-08 | 2 | 55 | 296 | 349 |
GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgy 349 ++va g rrerhe++ +W + ++ aGF+ +p+++ + k+ + ++ g Zpz_sc03274.1.g00010.1.sm.mk 2 DIVAGYGVLRRERHEKMTHWLMLMTVAGFELIPMTYGVFKETAIAAHLLSGSGS 55 899999*****************************9999887776666665554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03514 | 2.5E-5 | 2 | 55 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 73 aa Download sequence Send to blast |
MDIVAGYGVL RRERHEKMTH WLMLMTVAGF ELIPMTYGVF KETAIAAHLL SGSGSNMRIV 60 QMFNQGKSAN LQF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc03274.1.g00010.1.sm.mk |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP69233 | 2 | 2 |