PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03189.1.g00080.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 658aa    MW: 71890 Da    PI: 8.7028
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03189.1.g00080.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.87e-31401459259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY++eHnh+
  Zpz_sc03189.1.g00080.1.am.mk 401 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPSMLVITYNSEHNHP 459
                                   699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.902395461IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.1E-31397461IPR003657WRKY domain
SuperFamilySSF1182903.66E-26398461IPR003657WRKY domain
SMARTSM007742.9E-38400460IPR003657WRKY domain
PfamPF031063.9E-26402459IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    Send to blast
MLRSIDHQRT DTKRYALDRV PLNDRASFGR DQVVVTNQNT GAKDAFKHGV RILCEREKDL  60
AAERPRTHVY RYANCKRRLG MAAPSGLHSW TCCLPSLWPR RQRAVRQASI LRDRELPIPV  120
VFYRLRPQLF TSSTERERER ERALAAAQEK EVSDRPVHDS IFRFSIRGRA PPLPLERIRR  180
RVMCDYFSQR MEGDHNHQHR QAGDLADIVR AGGVGLADLP STPTEWHLPA EPGTTSFFPP  240
PQEQSSSDDD GFVVADALAV GLPDPFGTRD YRAASATGAA GFFDFEAPVG DGGGALLDCG  300
GGGVVVPRAT PVLSPREIRP YPGMMAGDAV KLLGMPTVMP GGLTVGPPCA FDGVGGLHQM  360
PSPCGGDGRI KRRKNQARKV VCIPAPAALA GGRTTGEVVP SDLWAWRKYG QKPIKGSPYP  420
RGYYRCSSSK GCPARKQVER SRTDPSMLVI TYNSEHNHPW PTQRNALAGS TRSHHAKNNG  480
NNSSSKKNSS LQRPMVKAEW DQTAAAEATT TTTTSTSNST PPATSVKKDE MMASEMEKAG  540
VQQYAGHHDT SVVTLDPGDL MQQMFNQSYR PMIPEGGHHV DDFFADLAEL ESDPMSLIFS  600
KEYMETKPGG EPAAKEMAGP TKSLVDPLFN MLDWGATTAA VATFAGSSSL EQQGESGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-23374462280Disease resistance protein RRS1
5w3x_D7e-23374462280Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1367375GRIKRRKNQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03189.1.g00080.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004953547.10.0probable WRKY transcription factor 14
TrEMBLA0A2T7FAW80.0A0A2T7FAW8_9POAL; Uncharacterized protein
STRINGSi017095m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.17e-61WRKY DNA-binding protein 35