 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zpz_sc03187.1.g00020.1.sm.mkhc |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
E2F/DP |
Protein Properties |
Length: 340aa MW: 36974.6 Da PI: 8.2076 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc03187.1.g00020.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 42.8 | 8.5e-14 | 89 | 134 | 8 | 58 |
E2F_TDP 8 lltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnl 58
l+ +f++l+ +++ ++v l+++ak+L v +rRRiYDi+NVLe++++
Zpz_sc03187.1.g00020.1.sm.mkhc 89 RLSCSFVALYDREDVEAVGLDDAAKRL---GV--ERRRIYDIVNVLESVGI 134
58899******9999************...**..**************997 PP
|
2 | E2F_TDP | 71.9 | 7e-23 | 218 | 284 | 1 | 62 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliekk 62
rkeksL+lltq+f+kl+ + e ++++l+e+a+ L+ e ++++k+RR+YDi+NVL++lnliek
Zpz_sc03187.1.g00020.1.sm.mkhc 218 RKEKSLGLLTQNFVKLFLTMEVETISLDEAARLLLGEghaesNMRTKVRRLYDIANVLSSLNLIEKL 284
79****************************************************************4 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MDAAAAAAVA GPSSSSGAGA SAQPQPKVPQ AAVQGAAASK SCRHHAYSRK QKSLGLLCSK 60 CAPFSFRSRL SLARDARSGR SVALTQVSRL SCSFVALYDR EDVEAVGLDD AAKRLGVERR 120 RIYDIVNVLE SVGINTFLGW GGGDVVQILV RRAKNRYAWL GFGGVPAALK ELKASDDEDD 180 DKLGDADEDD ESEKLSQSVD NLSDKPGALP CRLRSDHRKE KSLGLLTQNF VKLFLTMEVE 240 TISLDEAARL LLGEGHAESN MRTKVRRLYD IANVLSSLNL IEKLGQGSRS DFVYGPFHPS 300 GAKKQEIGDH SVREERKSIQ DWENLAATFR PQYQNQVVGL
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Inhibitor of E2F-dependent activation of gene expression. Binds specifically the E2 recognition site without interacting with DP proteins and prevents transcription activation by E2F/DP heterodimers. Controls the timing of endocycle onset and inhibits endoreduplication. {ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11867638, ECO:0000269|PubMed:15649366, ECO:0000269|PubMed:18787127}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK375358 | 6e-63 | AK375358.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3092B12. |