PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03145.1.g00060.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 463aa    MW: 50970.5 Da    PI: 10.8985
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03145.1.g00060.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.64.1e-52551841128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrFhP+dee++++yL++kv ++++++ ++i e+di+k+ePw+Lp+k+k +ekewyf+s +  ky++g+r+nratk+g
  Zpz_sc03145.1.g00060.1.am.mk  55 LPPGFRFHPSDEEIITFYLRPKVINNRFTA-HAIGEADINKCEPWELPEKAKMREKEWYFYSLKGLKYPSGSRANRATKAG 134
                                   79*************************999.88***************99999**************************** PP

                           NAM  82 yWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatgkd+e++++++++   vg+kktLvfykgrap+g ktdWvmhe+rl
  Zpz_sc03145.1.g00060.1.am.mk 135 YWKATGKDREIYQATSKKpvlVGMKKTLVFYKGRAPTGDKTDWVMHEFRL 184
                                   *************85554566***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-5950221IPR003441NAC domain
PROSITE profilePS5100556.34455221IPR003441NAC domain
PfamPF023651.0E-2556184IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MYVVVASAWR CLVWPGLFAK DGLGTLDLRS LRSMADHHQQ QWRTSDDTNS GRLKLPPGFR  60
FHPSDEEIIT FYLRPKVINN RFTAHAIGEA DINKCEPWEL PEKAKMREKE WYFYSLKGLK  120
YPSGSRANRA TKAGYWKATG KDREIYQATS KKPVLVGMKK TLVFYKGRAP TGDKTDWVMH  180
EFRLDGSGKL PHPAASSSSS TSMVMKSSSQ EEWVICRIYL KSSSVKKAPT PSVDIASMVG  240
DVEQRSMSFP LPMQFPMGPR DFAGGSNTLR HIMDPSPGEV LARKTGSLIA ADPEPVIAYA  300
VAEMRSARHH GRTKVEQSPV TGENRTEGSV RPAESPCRRT STTVLGAPAP PGPAALGVPT  360
AGYCWRPRVP RCRLRRVQSI GRAGAALARR IPSRVLSHPL LQGGQAGARS SLTRRSSSVT  420
HPLLQGGTVT RSAAERAPSV RSHLANHRTV VTKRLICNGL LVQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-455222714171NO APICAL MERISTEM PROTEIN
1ut4_B1e-455222714171NO APICAL MERISTEM PROTEIN
1ut7_A1e-455222714171NO APICAL MERISTEM PROTEIN
1ut7_B1e-455222714171NO APICAL MERISTEM PROTEIN
4dul_A1e-455222714171NAC domain-containing protein 19
4dul_B1e-455222714171NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03145.1.g00060.1.am.mk
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025801540.13e-90NAC domain-containing protein 79-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3311234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.16e-68NAC domain containing protein 6