 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc02924.1.g00040.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WRKY |
| Protein Properties |
Length: 353aa MW: 38505.4 Da PI: 6.9313 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc02924.1.g00040.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 37 | 6.8e-12 | 105 | 126 | 2 | 23 |
--SS-EEEEEEE--TT-SS-EE CS
WRKY 2 dDgynWrKYGqKevkgsefprs 23
+DgynWrKYGqK+vkgse+pr
Zpz_sc02924.1.g00040.1.sm.mkhc 105 EDGYNWRKYGQKHVKGSENPRR 126
8*******************96 PP
|
| 2 | WRKY | 108.6 | 2.9e-34 | 245 | 303 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++dpk v++tYeg+Hnhe
Zpz_sc02924.1.g00040.1.sm.mkhc 245 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHNGCPVRKHVERASHDPKSVITTYEGKHNHE 303
59********************************************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MAAIINKSTH PDILPSPRNK SVGNGHEDEG SQDFEFKPHL NSSTQSMDST HKVNGSSGPN 60
QPVAMVGLSD SMPSEVGTSE LQQMNSSENA VQETHSENVA EKSAEDGYNW RKYGQKHVKG 120
SENPRRRHNH PKPQPNRRLT AGAVPSSQGE EKYDVATAEV KSGVSDLCNA VHSAGMIEPA 180
LGPASDDDID AGGGRPYPGD DANEDDDLDS KRRKMESAGI DAALMGKPNR EPRVVVQTVS 240
EVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTHNGCPVRK HVERASHDPK SVITTYEGKH 300
NHEVPASRNA SHEISTAPMK TTRRLRLAVI AITTLAYPNP VSPYLPIDYS SGP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in starch synthesis (PubMed:12953112). Acts as a transcriptional activator in sugar signaling (PubMed:16167901). Interacts specifically with the SURE and W-box elements, but not with the SP8a element (PubMed:12953112). {ECO:0000269|PubMed:12953112, ECO:0000269|PubMed:16167901}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by sugar. {ECO:0000269|PubMed:12953112}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT054888 | 1e-150 | BT054888.1 Zea mays full-length cDNA clone ZM_BFc0109P23 mRNA, complete cds. |
| GenBank | BT061714 | 1e-150 | BT061714.1 Zea mays full-length cDNA clone ZM_BFb0176N11 mRNA, complete cds. |
| GenBank | KJ727861 | 1e-150 | KJ727861.1 Zea mays clone pUT5953 WRKY transcription factor (WRKY1) mRNA, partial cds. |
