PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc02845.1.g00060.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 509aa MW: 56667.5 Da PI: 6.0217

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc02845.1.g00060.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	33.4	1.4e-10	188	317	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknra... 77 +d lv + L++k+++++++ + +++ d++++ P++L + + +++ ++yfFs+++ a+ ++++r+ Zpz_sc02845.1.g00060.1.am.mk 188 SDARLV-DSLRAKIANQEIPHAVYFRDDDVCSLRPEELVRrhgkparvnpREAGDGLQYYFFSPAHFVGASRTKRSRIigg 267 577788.67*******999667**********744677775543222234488*99998888877886455 PP NAM 78 .tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ +W+a + k+v + + L ++ + ++ +k W+m ey++ Zpz_sc02845.1.g00060.1.am.mk 268 tEKKETWHAETSLKQVEG--AVDGFMMVKLSYHVKIGETVQKPGWLMTEYSF 317 444788**999977..666788888999999999********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02365	4.4E-7	123	316	IPR003441	NAC domain
PROSITE profile	PS51005	12.197	179	331	IPR003441	NAC domain
SuperFamily	SSF101941	7.59E-13	188	331	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence Send to blast
MAPYRQSWPR HRGVENELCE GDTCGRSRHL GDHLGALLRL QIGRRCRHVR PRREHLLERP 60 AMTTRLALLC SDWHLINRYS RHPSSPPPIS SRTPPRFAPS NSIAAVSPEI MAALGAAADD 120 DSFTFTPSDA RLVDSLRAKI ANQEIPHAVY FRDDDVCSLR PEELVRRHGK PARVNPREAG 180 DGLXXXXSDA RLVDSLRAKI ANQEIPHAVY FRDDDVCSLR PEELVRRHGK PARVNPREAG 240 DGLQYYFFSP AHFVGASRTK RSRIIGGTEK KETWHAETSL KQVEGAVDGF MMVKLSYHVK 300 IGETVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK AEDDLESETS 360 SMRQRHENVA APKFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT GDVHTGFGAL 420 TDGEAIAAYA SGGTVDELIP STMEEVHQPE SEVPPASTDG SMTFEELWQL LDTDIVDDGA 480 YLQLPADEIL AEEWLKDKET LQHVPLSDF

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence Send to blast

MAPYRQSWPR HRGVENELCE GDTCGRSRHL GDHLGALLRL QIGRRCRHVR PRREHLLERP  60
AMTTRLALLC SDWHLINRYS RHPSSPPPIS SRTPPRFAPS NSIAAVSPEI MAALGAAADD  120
DSFTFTPSDA RLVDSLRAKI ANQEIPHAVY FRDDDVCSLR PEELVRRHGK PARVNPREAG  180
DGLXXXXSDA RLVDSLRAKI ANQEIPHAVY FRDDDVCSLR PEELVRRHGK PARVNPREAG  240
DGLQYYFFSP AHFVGASRTK RSRIIGGTEK KETWHAETSL KQVEGAVDGF MMVKLSYHVK  300
IGETVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK AEDDLESETS  360
SMRQRHENVA APKFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT GDVHTGFGAL  420
TDGEAIAAYA SGGTVDELIP STMEEVHQPE SEVPPASTDG SMTFEELWQL LDTDIVDDGA  480
YLQLPADEIL AEEWLKDKET LQHVPLSDF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc02845.1.g00060.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45