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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zpz_sc02666.1.g00120.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
MIKC_MADS |
| Protein Properties |
Length: 278aa MW: 32045.1 Da PI: 7.7863 |
| Description |
MIKC_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc02666.1.g00120.1.sm.mk | genome | ZGD | View Nucleic Acid |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 82.2 | 3.4e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
k+ien s rqvtfskRr g+lKKA+EL +LCda++ viifs +gk+yeyss
Zpz_sc02666.1.g00120.1.sm.mk 9 KKIENPSSRQVTFSKRRMGLLKKANELAILCDAQIGVIIFSDSGKMYEYSS 59
68***********************************************96 PP
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| 2 | K-box | 42.5 | 2.8e-15 | 85 | 161 | 14 | 90 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90
+++ +e++++k+e + L+ +++ +dL Lsl++ +LeqqLe sl k+R +K+ell +q+ e++++e +++e+
Zpz_sc02666.1.g00120.1.sm.mk 85 QQKIIREMTRMKDERNRLRIIMGQYMSDDLALLSLQDVTNLEQQLEFSLYKVRLRKQELLDQQLLEMRHREMRVSED 161
577889*****************************************************************999875 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| PROSITE profile | PS50066 | 31.048 | 1 | 61 | IPR002100 | Transcription factor, MADS-box |
| SMART | SM00432 | 2.2E-38 | 1 | 60 | IPR002100 | Transcription factor, MADS-box |
| SuperFamily | SSF55455 | 2.22E-29 | 2 | 78 | IPR002100 | Transcription factor, MADS-box |
| CDD | cd00265 | 5.19E-38 | 2 | 75 | No hit | No description |
| PROSITE pattern | PS00350 | 0 | 3 | 57 | IPR002100 | Transcription factor, MADS-box |
| PRINTS | PR00404 | 2.7E-27 | 3 | 23 | IPR002100 | Transcription factor, MADS-box |
| Pfam | PF00319 | 4.4E-25 | 10 | 57 | IPR002100 | Transcription factor, MADS-box |
| PRINTS | PR00404 | 2.7E-27 | 23 | 38 | IPR002100 | Transcription factor, MADS-box |
| PRINTS | PR00404 | 2.7E-27 | 38 | 59 | IPR002100 | Transcription factor, MADS-box |
| Pfam | PF01486 | 1.3E-12 | 82 | 160 | IPR002487 | Transcription factor, K-box |
| PROSITE profile | PS51297 | 10.629 | 85 | 176 | IPR002487 | Transcription factor, K-box |
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MGRGKVELKK IENPSSRQVT FSKRRMGLLK KANELAILCD AQIGVIIFSD SGKMYEYSSP 60
PWRIANIFDR YLKAPCTRFD EMDIQQKIIR EMTRMKDERN RLRIIMGQYM SDDLALLSLQ 120
DVTNLEQQLE FSLYKVRLRK QELLDQQLLE MRHREMRVSE DLCLMVRRTV PAFFSSGRLI 180
LCVLVSASCP DELALCTVPL GQQTQSADEM VANPTNKPFP WWDDAGSSQQ LYGHHDAEPS 240
TMTALQLLPQ LGEYNKLQPL QPNLQDAAGL QSFILRLW
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. |
