PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02648.1.g00060.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 733aa    MW: 78325.6 Da    PI: 8.9404
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02648.1.g00060.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-10123169450
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                                    kr +r   NR +A+rsR RK+++i eLe+ v +L+ e +aL  ++ 
  Zpz_sc02648.1.g00060.1.am.mk 123 PKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQMEVSALSPRVA 169
                                   5999*********************************9999987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-13120184IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.634122178IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-13124178No hitNo description
SuperFamilySSF579594.5E-11124178No hitNo description
PfamPF001704.8E-9124172IPR004827Basic-leucine zipper domain
CDDcd147039.58E-25125175No hitNo description
PROSITE patternPS000360127142IPR004827Basic-leucine zipper domain
PfamPF016992.9E-8570724IPR004837Sodium/calcium exchanger membrane region
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    Send to blast
MAHLPPRAPS AGPGAQDPWS AAGEFHGFAA ARRGAHRRSA SDSAAFLEAV PMDDVIGGGD  60
EFDRLDDEQL MSMFSDVDGP AVSDGAGDRA AEAQLMDVGD AEDMSPAGAR AAAQATADGA  120
ADPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQME VSALSPRVAF LDHQRSLLTV  180
GNSHLKQRIA ALAQDKIFKD AHQEALKKEI ERLRQLYHQQ QIKATGGAER ATAASTQARQ  240
ELLVLDRDDR CAAGRRHRPP CVLPRPKAPE PTQLPVQILK PSNGRPSRPG QALAHGARRI  300
NQAGEPGLGD TAVTGDGENW RGIGGGREEP GSSTRRRLVG TGCFGAPEFE AQAHDTSTPV  360
VFEPLNRYTY ASLTCRFFRT QIRRPNCTAA QTWQPVNRAR PEAVRVSTAA REAESGTTQR  420
VLPGGTRRRH TTASTASEPQ PRAHLLSCSS RSGTPVAFHT APEPLSHSTP LLPRRLPQTR  480
TRALLPAHSL PMAVPRTLLL LVAVGGAVTL THGRLLVRDD DGGGGFLPGS ATALRLPSWA  540
ATVAAAGGEE CEMPYGFLPC TATVGGNLFL VLAYGFLVFK SATYLSAGSE LLLAILGPGI  600
VGGLCLPILG ALPDTMLILV SGLAGTKEVA QSQVLIGMGL LAGSTVMLLT LLWGSCVVVG  660
KCDLPDNSTA IDSRDTKGFS LFEVLVIFLV CMIMGLFTSF RTKFPLWTCL VAFLLYPSSL  720
IVVYVLDFKF GWT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02648.1.g00060.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0962471e-178FP096247.1 Phyllostachys edulis cDNA clone: bphyst038a13, full insert sequence.
GenBankFP0974721e-178FP097472.1 Phyllostachys edulis cDNA clone: bphylf047m15, full insert sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-52bZIP family protein