PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02629.1.g00080.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 400aa    MW: 42425.7 Da    PI: 8.5932
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02629.1.g00080.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.5e-10165227163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke ++  +e+ +lk  +
  Zpz_sc02629.1.g00080.1.sm.mkhc 165 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNESMKKEKDMVMQEYLSLKEAN 227
                                     89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.7E-6163230No hitNo description
SMARTSM003382.3E-12165229IPR004827Basic-leucine zipper domain
PfamPF001701.9E-8165228IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.082167230IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-7169225No hitNo description
CDDcd147021.06E-12170220No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MALLPSHRTL DARFRRTTCP PARTASGNQI FKLRSLEIEI DRCQSPVMSE DSDGQRPCRR  60
GVNVHELDAA MALADMAGVG PDQQQQQQPQ PPPAAPQAER EDEELASTRL SLELGKVGIQ  120
SSPCSSSSSA GHHHPAPQQQ PPLMPAAAAV SGYGPRPRHM LTEAEKEAKR LRRVLANRES  180
ARQTILRRQA IRDELARKVA DLSSQNESMK KEKDMVMQEY LSLKEANKQL KEQADPSLSL  240
SVARTTKKAP AAARVPVSTG AQVAAPPTQQ EAAIAASSPR TTPPQPSFLY TAAPPAVPVP  300
YDPLAAAAEP TSGGAGPAGA GTAEEDTDDD PCSLTLALDV DKRSAPIAIG SCGGGSRAAT  360
EAAGGEKGKA ATAAEARKRR KELTKLKHMH ADGRPGGEQW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1376381RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02629.1.g00080.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2457502e-81DQ245750.1 Zea mays clone 20079 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615785.19e-83uncharacterized protein LOC4349815
TrEMBLA0A3B6KDZ06e-94A0A3B6KDZ0_WHEAT; Uncharacterized protein
TrEMBLA0A446SWI26e-94A0A446SWI2_TRITD; Uncharacterized protein
STRINGTraes_5BL_6C613A3D9.15e-86(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.13e-17bZIP family protein