PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc02621.1.g00020.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 1054aa MW: 112708 Da PI: 10.3283

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc02621.1.g00020.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.8	3.2e-14	732	813	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessst 78 W++ + aLi+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s qCk++++ l+k+yk +++ +++ + Zpz_sc02621.1.g00020.1.am.mk 732 WSDGATSALIDAWGERFVALGRGSLRHPQWQEVAEVVsSRDGYTKppkSDAQCKNRIDTLKKKYKVERAKRNS-------S 805 ***********************************87889977333667**********99998886.......5 PP trihelix 79 cpyfdqle 86 +p+fd+l+ Zpz_sc02621.1.g00020.1.am.mk 806 WPFFDRLD 813 ****98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.200.20	1.7E-17	123	214	No hit	No description
SuperFamily	SSF56112	6.6E-14	126	217	IPR011009	Protein kinase-like domain
Pfam	PF07714	1.2E-6	143	216	IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain
PROSITE pattern	PS00107	0	144	167	IPR017441	Protein kinase, ATP binding site
Pfam	PF13837	6.7E-23	730	815	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 1054 aa Download sequence Send to blast
MRRARLLVRR CRAWWIRSRS RGRHDLLTAP RTNPRIIVVN SIVRSGDEGD GGGAEEDSYG 60 PPASQAAPPP NVNAPGPTLS IDQQFQFLLD RETTNLTSRN RGGPRGPGAP RPGGPAKPVN 120 IDVPAIPFDE LKKITNNFSD RALLGEGSYG RVYNATLSDG RAAVIKKLDP SASQDSDADF 180 AAQIAMVSKL KNEYFLELVG YCLEDGNRML AYQFATMALC VQYESDFRPN MTIVVKAIQP 240 LLNAKPAGPP AAEPHEQALA HNVVAHGVTV FGSHPHDGKH FRQELDSIVN LTFQPDAMDN 300 DVVGEDVGDS GAPFGAHLIK ASFGFCSVTP ITSSGVLPSV GRTSRQARPD TNQHQDREDG 360 TPATIRSPGP PAKQQRGASP TRLGSYQSGA ATHRMLITPS ASRYKPPTRS SRAKCFLLPH 420 GGASEEGPCC RGPPTVLVVL LSSSWSLAEA SPTPSPSAAT AHAPPPRQPA TSASPPDAPP 480 PLAPRPKGHH RGAHGNRAAP PPVDKYSRSW WQRLNLGQKV GIALAAVAVA MQVAFVAFPG 540 GARAAAAADG EGMGERLVVP LSRAATSGNG CLHDVSGSAW PPWISLEAGA LFRRAVRGQH 600 QTPRPGPVKR GPTRKQSFRS VTGRQVTTTS PRRRTRRPEQ IRAHSAPPHP GNIPKPSPSS 660 SSSAGARSPA MDDDAGASPS PSPSPSRSPS PLPVADPVTV ASAPPGHIAV AIPLRKPSPS 720 SGGGGGGRED AWSDGATSAL IDAWGERFVA LGRGSLRHPQ WQEVAEVVSS RDGYTKPPKS 780 DAQCKNRIDT LKKKYKVERA KRNSSWPFFD RLDDLLAPVY KLGSGSSSAA RNTPPMVPPR 840 FSFPQRTRTQ LQPSAGVKRR MPSPPPKPSA SSDSSDGFPP EPPLANGKRQ RVEEPTPANG 900 AESSDHAQGL RELALAIRRL GEVYERVESA KREQELRMEQ ERLEATRELE DQRVQFFLKM 960 QMELSKATGG AHSATPMAAA TAVDGNGSRR AAEATDVATS SNHKVRYRIK DSRHRHTAQQ 1020 PHYQYSQNNS SAAAPSSGNG SDSDNKEDED EESQ

Sequence ? help Back to Top

Protein Sequence Length: 1054 aa Download sequence Send to blast

MRRARLLVRR CRAWWIRSRS RGRHDLLTAP RTNPRIIVVN SIVRSGDEGD GGGAEEDSYG  60
PPASQAAPPP NVNAPGPTLS IDQQFQFLLD RETTNLTSRN RGGPRGPGAP RPGGPAKPVN  120
IDVPAIPFDE LKKITNNFSD RALLGEGSYG RVYNATLSDG RAAVIKKLDP SASQDSDADF  180
AAQIAMVSKL KNEYFLELVG YCLEDGNRML AYQFATMALC VQYESDFRPN MTIVVKAIQP  240
LLNAKPAGPP AAEPHEQALA HNVVAHGVTV FGSHPHDGKH FRQELDSIVN LTFQPDAMDN  300
DVVGEDVGDS GAPFGAHLIK ASFGFCSVTP ITSSGVLPSV GRTSRQARPD TNQHQDREDG  360
TPATIRSPGP PAKQQRGASP TRLGSYQSGA ATHRMLITPS ASRYKPPTRS SRAKCFLLPH  420
GGASEEGPCC RGPPTVLVVL LSSSWSLAEA SPTPSPSAAT AHAPPPRQPA TSASPPDAPP  480
PLAPRPKGHH RGAHGNRAAP PPVDKYSRSW WQRLNLGQKV GIALAAVAVA MQVAFVAFPG  540
GARAAAAADG EGMGERLVVP LSRAATSGNG CLHDVSGSAW PPWISLEAGA LFRRAVRGQH  600
QTPRPGPVKR GPTRKQSFRS VTGRQVTTTS PRRRTRRPEQ IRAHSAPPHP GNIPKPSPSS  660
SSSAGARSPA MDDDAGASPS PSPSPSRSPS PLPVADPVTV ASAPPGHIAV AIPLRKPSPS  720
SGGGGGGRED AWSDGATSAL IDAWGERFVA LGRGSLRHPQ WQEVAEVVSS RDGYTKPPKS  780
DAQCKNRIDT LKKKYKVERA KRNSSWPFFD RLDDLLAPVY KLGSGSSSAA RNTPPMVPPR  840
FSFPQRTRTQ LQPSAGVKRR MPSPPPKPSA SSDSSDGFPP EPPLANGKRQ RVEEPTPANG  900
AESSDHAQGL RELALAIRRL GEVYERVESA KREQELRMEQ ERLEATRELE DQRVQFFLKM  960
QMELSKATGG AHSATPMAAA TAVDGNGSRR AAEATDVATS SNHKVRYRIK DSRHRHTAQQ  1020
PHYQYSQNNS SAAAPSSGNG SDSDNKEDED EESQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5xd6_A	2e-22	121	215	7	99	Protein kinase superfamily protein
5xd6_B	2e-22	121	215	7	99	Protein kinase superfamily protein

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00413	DAP	Transfer from AT3G58630	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc02621.1.g00020.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU965091	1e-145	EU965091.1 Zea mays clone 283747 mRNA sequence.

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2404	30	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11100.1	5e-35	sequence-specific DNA binding transcription factors