PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zpz_sc02514.1.g00070.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 225aa MW: 24562.3 Da PI: 8.1265 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.7 | 9.1e-12 | 111 | 168 | 3 | 60 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 e +r rr+ +NRe+ArrsR RK+ ++ eL v +L + N++L +el++ +a + Zpz_sc02514.1.g00070.1.am.mk 111 EERRRRRMVSNRESARRSRMRKQRQLSELWAQVSQLRGANRRLLDELNRALRSCADAR 168 67899*******************************************9888887655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.0E-9 | 108 | 165 | No hit | No description |
SMART | SM00338 | 1.7E-11 | 109 | 173 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.3E-9 | 110 | 160 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.726 | 111 | 174 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.95E-10 | 113 | 161 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 116 | 131 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.58E-16 | 118 | 165 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 225 aa Download sequence Send to blast |
MYHHFHGEVA SLRFLSPPNP SFATHHHMNM ALPPQAYFPP SFEPTSPFQE DPATAALLGG 60 DMDHMATFEF DTVVREAAHV AGGNGSPSSG SGSDGGGGGY PLNAAAASAE EERRRRRMVS 120 NRESARRSRM RKQRQLSELW AQVSQLRGAN RRLLDELNRA LRSCADARRE NARLKDEKAE 180 LAKKLEQLLQ AQAVATEKSA EAGAYPSIHS CPSGPCNYTS TSISE |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 125 | 132 | RRSRMRKQ |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Zpz_sc02514.1.g00070.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | EU976632 | 3e-85 | EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_025821559.1 | 4e-92 | bZIP transcription factor 2-like | ||||
TrEMBL | A0A3L6RJ77 | 3e-93 | A0A3L6RJ77_PANMI; G-box-binding factor 1 | ||||
STRING | Pavir.Fb01824.1.p | 7e-82 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G13600.1 | 2e-10 | basic leucine-zipper 58 |