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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc02430.1.g00080.1.am.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 363aa MW: 39826 Da PI: 10.8108 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc02430.1.g00080.1.am.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 99.9 | 1.5e-31 | 184 | 281 | 1 | 90 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74
f+k+ tpsdv+k++rlv+pk++ae+h g + +++ l +ed +g++W+++++y+++s++yvltkGW++Fvk++gL
Zpz_sc02430.1.g00080.1.am.mk 184 FDKTVTPSDVGKLNRLVIPKQHAEKHfplelpsAGGESKGVLLNFEDAEGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGL 264
89*******************************5556799***************************************** PP
-TT-EEEEEE-SS.SEE CS
B3 75 kegDfvvFkldgr.sef 90
++gD+v F+++ ++
Zpz_sc02430.1.g00080.1.am.mk 265 NAGDVVGFYRTAAgADT 281
*********76544554 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MVSKGDILNH DARHPPNRRG HITPTSPRTY PSILHFRNVF VQRQESFRAQ LSSGAHARNG 60 QRELPRGRYR RRRVWLGTFA GEGDAARAYD VAVQRFRGRD AVTNFRPLAD ADPDAAAELR 120 FLASRSKAEV VDMLRKHTYF DELAQNRRAF ASAPTTSSSL AANNHDSSSS SPSPASAAAR 180 EHLFDKTVTP SDVGKLNRLV IPKQHAEKHF PLELPSAGGE SKGVLLNFED AEGKVWRFRY 240 SYWNSSQSYV LTKGWSRFVK EKGLNAGDVV GFYRTAAGAD TKLFIECKLR PKNGAAVSVA 300 ANPVINVPSS APVTKTVRLF GVDLLTAPAP EAAMGTGCKR ARDFAATPTQ AAFKKPLVEL 360 ALV
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 1e-51 | 178 | 294 | 2 | 117 | B3 domain-containing transcription factor NGA1 |
5os9_B | 1e-51 | 178 | 294 | 2 | 117 | B3 domain-containing transcription factor NGA1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KJ727870 | 0.0 | KJ727870.1 Zea mays clone pUT5962 AP2-EREBP transcription factor (EREB126) gene, partial cds. |