PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02399.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 245aa    MW: 25121.4 Da    PI: 4.3805
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02399.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.1e-162876355
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ykGVr ++ +g+Wv+e+r p   g ++r++lg++ tae Aa+a++aa ++l+g
  Zpz_sc02399.1.g00030.1.am.mk 28 YKGVRMRS-WGSWVSEVRAP---GAKARIWLGSHSTAEAAARAYDAALLCLRG 76
                                  9****998.*******9998...445*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.6E-162787IPR016177DNA-binding domain
SMARTSM003803.3E-282792IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.3E-262786IPR001471AP2/ERF domain
PROSITE profilePS5103220.892786IPR001471AP2/ERF domain
PRINTSPR003674.7E-82839IPR001471AP2/ERF domain
CDDcd000184.02E-152888No hitNo description
PfamPF008475.2E-102876IPR001471AP2/ERF domain
PRINTSPR003674.7E-85066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MVKTAALCND TAAPAPAAAK RNGGKRAYKG VRMRSWGSWV SEVRAPGAKA RIWLGSHSTA  60
EAAARAYDAA LLCLRGSAAA ADLNFPVQLP VDGLPAATAM SPKSIQRVAA AAAAAGATAF  120
ASRADDVDVP CCSGDDSAPA CSSXXXXGGT EALSVSSLGS TVTSGTEPDA ACCHGDQKLR  180
DGDVDCSLLA DIDAYFPSPK CMEYAMMDPC SAFFAPAPMA MMSDDEVCLM DEGDIALWAF  240
STLDC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1128911577Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02399.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964908.17e-68ethylene-responsive transcription factor ERF014
TrEMBLA0A1E5WA758e-67A0A1E5WA75_9POAL; Uncharacterized protein
STRINGSi007977m3e-67(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-23ERF family protein