PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02391.1.g00020.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 701aa    MW: 77911.6 Da    PI: 4.8332
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02391.1.g00020.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.74.6e-531182461129
                             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknra 77 
                                     l+pGfrFhPtdeelv++yLk+kv g++l++ ++i+evd+yk+ePwdLp+  ++++++++wyfFs+ d+k+a+  r+nra
  Zpz_sc02391.1.g00020.1.am.mkhc 118 LAPGFRFHPTDEELVSYYLKRKVLGRPLKV-DAIAEVDLYKIEPWDLPArsRLRSRDSQWYFFSRLDRKHANRARTNRA 195
                                     579***************************.99***************4357888999********************* PP

                             NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                                     t+ gyWk+tgkd+ev + + ++vg+kktLvf+ grapkg++t+Wvmheyrle
  Zpz_sc02391.1.g00020.1.am.mkhc 196 TSGGYWKTTGKDREVRH-GLRVVGMKKTLVFHAGRAPKGQRTNWVMHEYRLE 246
                                     *****************.99******************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.15E-61113263IPR003441NAC domain
PROSITE profilePS5100559.279118263IPR003441NAC domain
PfamPF023652.4E-28120245IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 701 aa     Download sequence    Send to blast
MAHQDWIEAG RPFRRRAHQV KWHTARWDFQ RMCCPSHDSS ITGSWAQVHA QATPSVFIFF  60
LQTKLSPIQS NPILLILLLQ SPSNHSQPRR RSWRMTLPSS SSSSAPPPPA AGTEATSLAP  120
GFRFHPTDEE LVSYYLKRKV LGRPLKVDAI AEVDLYKIEP WDLPARSRLR SRDSQWYFFS  180
RLDRKHANRA RTNRATSGGY WKTTGKDREV RHGLRVVGMK KTLVFHAGRA PKGQRTNWVM  240
HEYRLEGDET PQDSFVVCRI FQKAGPGPQN GAQYGATFVE EEWEEDDEDA GLLPVGGDAI  300
EDAVAEREAP VAMEKGYLQM SDLMQGLGDQ TGNSTIDLPD SDTSNNGNHS EDVDGSSGDI  360
LNDPNLGSSF RQYDELGEQN NSLMFIENML SNANDENLFH SSSPSDEFLE LKDFADATNL  420
EYPLGAHSTI WPSDGWTWKT PDSFDDINGA NNEIPPLPGD QTFQSDELEQ LLQSIQEDTH  480
LGSNTTDPPH SSIKNSVMAE DDSVMFYDMP FDSAICEEGF THPNGIHTAP TTNISGIDMV  540
DDGIPYYDAI DDSLFDDILG SIQQPAGSSS HAFNGPVLVQ EVNNTTYTYS PAQKVLEPNF  600
VVGAPSARLP EAGSQLNCVV LPGKFTKSTI GQYLFAYWHS YIVGLSPCVL TGPGIFILVV  660
FTRPHLARLK YQTISYRQEN VAQSCLIRAG VYTAGMQIPG H
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-4611726314168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02391.1.g00020.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820240.10.0NAC domain-containing protein 53-like
TrEMBLA0A2S3I4R10.0A0A2S3I4R1_9POAL; Uncharacterized protein
TrEMBLA0A2T7DAU20.0A0A2T7DAU2_9POAL; Uncharacterized protein
STRINGPavir.Fa00048.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP71073650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.15e-80NAC domain containing protein 2