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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zpz_sc01970.1.g00080.1.sm.mk |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
WRKY |
| Protein Properties |
Length: 317aa MW: 34194.6 Da PI: 9.8426 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01970.1.g00080.1.sm.mk | genome | ZGD | View Nucleic Acid |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.2 | 4.6e-30 | 177 | 236 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ k++++pr+Y+rC++a +Cpvkkkv+rsaed+++++ tYegeHnh
Zpz_sc01970.1.g00080.1.sm.mk 177 VKDGYQWRKYGQKVTKDNPCPRAYFRCSFApSCPVKKKVQRSAEDKTILVATYEGEHNHG 236
58***************************99****************************5 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MDPWIGQPSL SLDLNVGLPT ARPVPAKKAL VEENFLPAKK GRGQVEALEA ELRLVSEENS 60
RLSEMLRAAV AKYTELRGHV NDMMAAGHTR QSSTSEGGSA SPPRKRVRSD SLDTKPLATA 120
ASGFAVPDQM ECTSGAAAAT AAAVAFHEPG RRIREGCKPK VTRQYVHADP SDLSLVVKDG 180
YQWRKYGQKV TKDNPCPRAY FRCSFAPSCP VKKKVQRSAE DKTILVATYE GEHNHGQPTQ 240
HDGRNAAAKP QTSNAAAARA LSPPQQKQQE AAGPSEEVVR KNLAEHMAAT LTRDPGFKAA 300
LVSALSGRIL ELSPTRE
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:23462973). Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (PubMed:21961049). Regulates negatively the basal defense responses to the compatible fungus M.oryzae (PubMed:23462973, PubMed:21726398). {ECO:0000250|UniProtKB:Q6QHD1, ECO:0000269|PubMed:21726398, ECO:0000269|PubMed:21961049, ECO:0000269|PubMed:23462973}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (PubMed:23462973). Accumulates in response to M.oryzae (PubMed:21726398). {ECO:0000269|PubMed:21726398, ECO:0000269|PubMed:23462973}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ728369 | 1e-106 | KJ728369.1 Zea mays clone pUT6651 WRKY transcription factor (WRKY124) mRNA, partial cds. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Zhang Y,Wang L
The WRKY transcription factor superfamily: its origin in eukaryotes and expansion in plants.
BMC Evol. Biol., 2005. 5: p. 1
[PMID:15629062] - Wu KL,Guo ZJ,Wang HH,Li J
The WRKY family of transcription factors in rice and Arabidopsis and their origins.
DNA Res., 2005. 12(1): p. 9-26
[PMID:16106749] - Berri S, et al.
Characterization of WRKY co-regulatory networks in rice and Arabidopsis.
BMC Plant Biol., 2009. 9: p. 120
[PMID:19772648] - Delteil A, et al.
Building a mutant resource for the study of disease resistance in rice reveals the pivotal role of several genes involved in defence.
Mol. Plant Pathol., 2012. 13(1): p. 72-82
[PMID:21726398] - Peng Y,Bartley LE,Canlas P,Ronald PC
OsWRKY IIa Transcription Factors Modulate Rice Innate Immunity.
Rice (N Y), 2010. 3(1): p. 36-42
[PMID:21961049] - Chujo T, et al.
OsWRKY28, a PAMP-responsive transrepressor, negatively regulates innate immune responses in rice against rice blast fungus.
Plant Mol. Biol., 2013. 82(1-2): p. 23-37
[PMID:23462973] - Yazawa T,Kawahigashi H,Matsumoto T,Mizuno H
Simultaneous transcriptome analysis of Sorghum and Bipolaris sorghicola by using RNA-seq in combination with de novo transcriptome assembly.
PLoS ONE, 2013. 8(4): p. e62460
[PMID:23638091]
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