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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc01888.1.g00110.1.am.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 323aa MW: 35076.9 Da PI: 4.1531 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01888.1.g00110.1.am.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.8 | 3.2e-19 | 134 | 185 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g++vAeIrdp+ +g r++lg+++ + +Aa+a++ a+ +++g+
Zpz_sc01888.1.g00110.1.am.mk 134 KYRGVRQRP-WGKYVAEIRDPKRRG--SRVWLGTYDLPIDAARAYDSAAFRMRGA 185
8********.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009409 | Biological Process | response to cold |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:1902074 | Biological Process | response to salt |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MDFTGEADDF ALDFIRDLLL GNDDGFPEAS WVVSDDPSCF PVLPPPTVEP AFEPMPFSSH 60 QQQQEEEELP EWYVDMTHDH TCAAPTAAVA EGAFLVAQEP AQPVMITFES EQLSPVSSHE 120 WAASAPAPVE DFRKYRGVRQ RPWGKYVAEI RDPKRRGSRV WLGTYDLPID AARAYDSAAF 180 RMRGAKAILN FPNEVGTRGA DLLASAPSSA KQGAAAKKRK LQQVDESDVE VVAVVNKAAK 240 VDEVPSWTTS TSVSSTSSPS SISTCPATDV VSSTVTSTET MVAGDGAEEF PGTPSSWSWE 300 QSWEELLYGL SPHLALIDMA DTS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727525 | 4e-67 | KJ727525.1 Zea mays clone pUT5385 AP2-EREBP transcription factor (EREB61) gene, partial cds. |