 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zpz_sc01759.1.g00050.1.am.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
NAC |
| Protein Properties |
Length: 339aa MW: 37314.5 Da PI: 10.2073 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01759.1.g00050.1.am.mkhc | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 111.6 | 8.9e-35 | 39 | 133 | 34 | 128 |
NAM 34 ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgr 112
++ vd+y+++PwdLp+ ++ ++kew+f+++rd+ky++g+r+nr+t sgyWkatg d+ v +++++ +glkktLvfy g+
Zpz_sc01759.1.g00050.1.am.mkhc 39 VNLVDLYRYDPWDLPALASIGDKEWFFYVPRDRKYRNGDRPNRVTPSGYWKATGADRMVRVEGNRSIGLKKTLVFYVGK 117
5678***********888889********************************************************** PP
NAM 113 apkgektdWvmheyrl 128
apkg +++W+m+eyrl
Zpz_sc01759.1.g00050.1.am.mkhc 118 APKGLRSSWIMNEYRL 133
**************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
APPVLAPPLA PINLIPPREK TATRTPRRYR PEPCWPLLVN LVDLYRYDPW DLPALASIGD 60
KEWFFYVPRD RKYRNGDRPN RVTPSGYWKA TGADRMVRVE GNRSIGLKKT LVFYVGKAPK 120
GLRSSWIMNE YRLPHGEADR YQKEISLCRV YKRPGIEDNF HLTGMTARSS GSKAAATMDK 180
KHRTSASPRL APMFDGGHSS GLMNKPYSGT NNGLTPSSVA AAAPAAVLQT SMFRSTAGSA 240
ASLSSATSTE EDGTSLYHLK GANPMLPSST HALLNANSTT MATIPIDELS RAVGSYNNNG 300
NPNQQPLPFQ GPLLPFPSME KIWDWNPLLE SPKVCPSFK
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-40 | 38 | 153 | 48 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-40 | 38 | 153 | 48 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-40 | 38 | 153 | 48 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-40 | 38 | 153 | 48 | 165 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 3e-40 | 38 | 153 | 48 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 3e-40 | 38 | 153 | 48 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
