 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc01752.1.g00080.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
TCP |
| Protein Properties |
Length: 443aa MW: 46350.4 Da PI: 9.55 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01752.1.g00080.1.sm.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 121.5 | 9.8e-38 | 58 | 204 | 2 | 131 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................. 65
g+kdrhsk++T++g RdRRvRls+ +a++f+dLqd+LG+d++sk+ieWL+++a ai++l+++
Zpz_sc01752.1.g00080.1.sm.mk 58 SGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGYDQPSKAIEWLIKAAADAIDKLPSLdaaagfpshpasaagat 138
689*************************************************************77775543333322221 PP
TCP 66 ssssaseceaesssssasnsssg.............kaaksaakskksqksaasalnlak.esrakarar...arertrek 129
s ++ ++ +++ + +s+ s++s+ s+l+la+ e r kar+r arer re+
Zpz_sc01752.1.g00080.1.sm.mk 139 S-----------------KDPAPadadaavadfddqGNQQRSGCSSTSETSKGSVLSLARsEGRVKARERcaqARERARER 202
1.................111112223344555554444444477777788888888888888866666666655555555 PP
TCP 130 mr 131
+
Zpz_sc01752.1.g00080.1.sm.mk 203 SA 204
43 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0030154 | Biological Process | cell differentiation |
| GO:0045962 | Biological Process | positive regulation of development, heterochronic |
| GO:1903508 | Biological Process | positive regulation of nucleic acid-templated transcription |
| GO:2000306 | Biological Process | positive regulation of photomorphogenesis |
| Sequence ? help Back to Top |
| Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MEACGGGVGE ARKRGRVKDG ETGGELPDAK RRAAALAQQP WAAQQHPASR IYRVSRASGG 60
KDRHSKVYTA KGIRDRRVRL SVATAIQFYD LQDRLGYDQP SKAIEWLIKA AADAIDKLPS 120
LDAAAGFPSH PASAAGATSK DPAPADADAA VADFDDQGNQ QRSGCSSTSE TSKGSVLSLA 180
RSEGRVKARE RCAQARERAR ERSAAAGRDK DKDPGDDGGA TGRRATATAS SFTELLTGMA 240
AAAAAAPAVA EHKQQASASW TPMTISATAD YIGFAQPRKA AGHAMAHTFA SPAPHLGNIS 300
MAPAAQHFGL SAGAVTVASG GGEPHAEMTQ FSFLQDHFMP GHAVPASGPA GDYNLNFSMS 360
SGLVGVNSRG TLQSNSQPHI SGHHHHHQQQ LQRLSTPLDA PNIPFLFSPA AAVTTPTAAD 420
TQFAAFQLWN GFHHADMKEK GKN
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU190456 | 1e-134 | EU190456.1 Zea mays RFLP probe php20581 (CBM 2.10) genomic sequence. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G18390.2 | 5e-41 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 |
