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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc01742.1.g00110.1.am.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 305aa MW: 32614.5 Da PI: 8.0698 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01742.1.g00110.1.am.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 42 | 92 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +gr++AeIrdp + r +lg+f+tae+Aa a++ a+++++g+
Zpz_sc01742.1.g00110.1.am.mk 42 RYRGVRRRP-WGRFAAEIRDPM----SkERRWLGTFDTAEQAACAYDVAARAMRGN 92
69*******.**********84....35999**********************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MDDAANVHLY GHVHALHHRS KRPPRAAAAV DEDGDMSPKG GRYRGVRRRP WGRFAAEIRD 60 PMSKERRWLG TFDTAEQAAC AYDVAARAMR GNKARTNFPV HATAGCWPWA PSPVAEPDHP 120 LRPFILQNLL MSSSHQGARC LLQHAGQGHG HINPAPNRMA PPSHPRSAAA SASGVMTTPG 180 AAATSSVSPP HVATLDGDDD VWDGLLKGEP PGAGLLQDAL HDFYPSTRPR GAGRKPSAVT 240 DARALTQQDW NEGFRAASPY GAEDVDEGGD CPMMPQGLLG DVIQFPAFVG FVTAPPTAPF 300 RGRSV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU954877 | 3e-80 | EU954877.1 Zea mays clone 1489895 AP2 domain containing protein mRNA, complete cds. |