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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc01705.1.g00030.1.sm.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 272aa MW: 29570.6 Da PI: 10.3989 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01705.1.g00030.1.sm.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 93.2 | 1.9e-29 | 35 | 147 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHH CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFv 69
f+kv tpsdv+k++rlv+pk++ae++ +++ ++ l++ed+ g+ W+++++y+++s++yv+tkGW++Fv
Zpz_sc01705.1.g00030.1.sm.mk 35 FEKVVTPSDVGKLNRLVIPKQHAERYfpalgpatsaaaASSEGKGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFV 115
99******************************99999977778999*********************************** PP
HHHT--TT-EEEEEE-.SS.SEE..EEEEE-S CS
B3 70 kangLkegDfvvFkld.gr.sefelvvkvfrk 99
k+++L +gD v F + g+ ++++++ ++r+
Zpz_sc01705.1.g00030.1.sm.mk 116 KEKRLGAGDAVEFARGvGDaARGRFFIDFRRR 147
*************9655888999999998887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MEFGRIAAVQ EDPERARGSG GGGGGVVWVE REHMFEKVVT PSDVGKLNRL VIPKQHAERY 60 FPALGPATSA AAASSEGKGL VLSFEDRAGK AWRFRYSYWN SSQSYVMTKG WSRFVKEKRL 120 GAGDAVEFAR GVGDAARGRF FIDFRRRRQD VSFLQPPALQ RLPLPSVPIC PWQDYGTYAP 180 APAPNRQVLF LRPQMPAAVV LSSVPARVAA STVEATRSKR LRLFGVNLDT PPVEDDSRVA 240 GTTSTLLQLP SPSSSTSSST AGKDICSLDL GL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 7e-54 | 30 | 147 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 7e-54 | 30 | 147 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
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