PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc01675.1.g00050.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 393aa MW: 40571.2 Da PI: 8.7402

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc01675.1.g00050.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	148.3	6.2e-46	21	125	2	104
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82 ++ r tw+ErEnn++RERrRR i+aki++GLRa Gny+lpk++DnneVl+ALc+eAGw+v +DGttyr+ + + Zpz_sc01675.1.g00050.1.am.mk 21 SAPRVLTWRERENNRLRERRRRMITAKIFTGLRAFGNYRLPKHCDNNEVLRALCNEAGWTVLPDGTTYRQAPVVAVDHTGI 101 677899***************************************************************766655555666 PP DUF822 83 gssasaspesslq..sslkssala 104 sa+as ss ssl s++ + Zpz_sc01675.1.g00050.1.am.mk 102 FGSATASAYSSFPlmSSLLSYNPS 125 667778888887633333343333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.3E-43	24	127	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence Send to blast
MKMTREGAGS VAGGSRAGGG SAPRVLTWRE RENNRLRERR RRMITAKIFT GLRAFGNYRL 60 PKHCDNNEVL RALCNEAGWT VLPDGTTYRQ APVVAVDHTG IFGSATASAY SSFPLMSSLL 120 SYNPSSATPS SLITLGGGNS SNNFFFTGGA GSSGGGAAAG SYNFTTLLKG MSGPAASPYP 180 SYSAANLTAP VAPPASASPQ LSLLLDKMAR WAKNSAAAGS SAQVPPPWGN GASSSRYAPP 240 SFPTANDPVG RLPLPDPATW LPGFQAPANS YGAPLGAYMG TGAAAGPSRL GAPGLNICPR 300 FPAFPHGGAV VTAPGNVNTA EEVSTEISLA VGSSAPGDVK PTEDVSTEIS LALGDAWANF 360 PAWNEEVSNE YNEEELKLTL GNASSRADRT WLN

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence Send to blast

MKMTREGAGS VAGGSRAGGG SAPRVLTWRE RENNRLRERR RRMITAKIFT GLRAFGNYRL  60
PKHCDNNEVL RALCNEAGWT VLPDGTTYRQ APVVAVDHTG IFGSATASAY SSFPLMSSLL  120
SYNPSSATPS SLITLGGGNS SNNFFFTGGA GSSGGGAAAG SYNFTTLLKG MSGPAASPYP  180
SYSAANLTAP VAPPASASPQ LSLLLDKMAR WAKNSAAAGS SAQVPPPWGN GASSSRYAPP  240
SFPTANDPVG RLPLPDPATW LPGFQAPANS YGAPLGAYMG TGAAAGPSRL GAPGLNICPR  300
FPAFPHGGAV VTAPGNVNTA EEVSTEISLA VGSSAPGDVK PTEDVSTEIS LALGDAWANF  360
PAWNEEVSNE YNEEELKLTL GNASSRADRT WLN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-16	44	90	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-16	44	90	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-16	44	90	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-16	44	90	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc01675.1.g00050.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP24462	4	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	2e-23	BES1/BZR1 homolog 4