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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01553.1.g00030.1.am.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 223aa MW: 24179.7 Da PI: 5.0509 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.1 | 6.7e-07 | 184 | 214 | 25 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkke 55 k+e+++L+ek++ L++eN++L ++l+el++e Zpz_sc01553.1.g00030.1.am.mkhc 184 KEELKQLQEKCDILTSENTSLHEKLKELEDE 214 799**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 7.5E-19 | 1 | 90 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MGKGDVTTRS KSQKSSAVQS EQSTSTNPPT VYPDWSQFQA YYNAAGTAPM TPPAFFHSPV 60 APNPQGHPYM WGPQGSHPYS PYPVQSPKGT VQTPGSRVKD GSERGQSNDA GNKGTGSAVE 120 PLQPSSGPVV LNPMMPFWPV PPPMAGPATA VNMSGDYWGA PTSAEWEEVA NRADLLKQEN 180 SSLKEELKQL QEKCDILTSE NTSLHEKLKE LEDEKSNGNW YKD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01553.1.g00030.1.am.mkhc |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025795522.1 | 6e-61 | bZIP transcription factor 16-like isoform X2 | ||||
TrEMBL | A0A059Q3D7 | 1e-102 | A0A059Q3D7_9POAL; Transcription factor | ||||
STRING | Pavir.Ia03945.1.p | 2e-59 | (Panicum virgatum) | ||||
STRING | Si040286m | 2e-59 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11506 | 32 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.2 | 2e-09 | G-box binding factor 1 |