PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01547.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 405aa    MW: 43411.8 Da    PI: 8.4953
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01547.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.43.4e-19228287358
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTT..EEEEEEES--SS CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpk..vveitYegeHnh 58 
                                   Dg+ WrKYGqK+++g ++pr Y+rC+++  gC+++++v+r++e+++  + ei Y g+H++
  Zpz_sc01547.1.g00010.1.am.mk 228 DGFIWRKYGQKKINGRKHPRLYHRCAYShqGCTATRRVQRTHEEEQppAYEIAYYGHHTC 287
                                   9************************88777**********9977553389********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182901.7E-18221287IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.2E-20221287IPR003657WRKY domain
SMARTSM007749.2E-23226289IPR003657WRKY domain
PROSITE profilePS5081116.34228273IPR003657WRKY domain
PfamPF031068.3E-21228287IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MRWPEQGVGR RSLAEDRSLG RLLVHACGAL KGRRGVETGL TCRGVKPGLT CRGVRHHFGQ  60
ATWRCDGRKT GGRRARAPAA FASLSGPTPI NTPGIWAHLA ASDPAVSFKL AVLPAETTET  120
NKATRVMAPP SNAHAVVLEQ MTMGQESAAH LVYLLPASPH QELAAEILRC CGRVIAAIRA  180
GGGGEKRKAV EHEDAAATTA VATCFPPRKR SRGAEAPIRV VTSGTTVDGF IWRKYGQKKI  240
NGRKHPRLYH RCAYSHQGCT ATRRVQRTHE EEQPPAYEIA YYGHHTCCGA GASSAPAPPP  300
YVVDSGSNAW VSVGGLAPPS GHHQLLSWDG EMSSASSAET GFEAEAQTVH EWHDTARTEE  360
PSATALPYAP DPVTQFLDGS FDWASVLNDD PFDFGSALQH VATLQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-142282871068OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01547.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817680.12e-91probable WRKY transcription factor 66
TrEMBLA0A2S3HQI14e-90A0A2S3HQI1_9POAL; Uncharacterized protein
STRINGSi002401m7e-83(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.15e-18WRKY DNA-binding protein 46