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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01514.1.g00050.1.es.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GeBP | ||||||||
Protein Properties | Length: 256aa MW: 28419.2 Da PI: 9.9563 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 39.8 | 1.2e-12 | 32 | 117 | 6 | 97 |
DUF573 6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83 ws++D i +L +l +++g ++ + v++s++ + s s+l eK+rrLK++++k v+k + s++ Zpz_sc01514.1.g00050.1.es.mkhc 32 AWSNKDSIKILEALAAHVQSEGR--LPKTNFLLAAVRDSLDrKDCSYSDLYEKVRRLKERYEKTVSK-----GVLPSEK 103 6****************999995..567899*********83579**********************.....3444566 PP DUF573 84 hdqkifelskkiWg 97 ++ ++++lsk iWg Zpz_sc01514.1.g00050.1.es.mkhc 104 DELQMYHLSKAIWG 117 6779*********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.1E-17 | 32 | 117 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
KAKKPGGKPE KSGLDSTQPL SKSEKSARAP CAWSNKDSIK ILEALAAHVQ SEGRLPKTNF 60 LLAAVRDSLD RKDCSYSDLY EKVRRLKERY EKTVSKGVLP SEKDELQMYH LSKAIWGDKA 120 KGAIAASATQ NVSTATKSNK GQDNKEKMDG SSRGGTSKDA THKEEAEIGA RMLQGMRRSS 180 DELQNLYPSL AWSVETMVLQ HPCGETLKRG FEFIDDQKAN SFESKIEKQR ISEVKVQLRR 240 ADISKEVLKM LNASAD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01514.1.g00050.1.es.mkhc |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003571636.1 | 2e-61 | hepatoma-derived growth factor-related protein 2 | ||||
TrEMBL | I1I2T6 | 6e-60 | I1I2T6_BRADI; Uncharacterized protein | ||||
STRING | BRADI3G20610.1 | 9e-61 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7289 | 27 | 37 |