PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc01511.1.g00020.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 1669aa MW: 180076 Da PI: 9.81

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc01511.1.g00020.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.8e-30	210	268	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY++eHnh+ Zpz_sc01511.1.g00020.1.am.mk 210 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPSMLVITYNSEHNHP 268 699**********************998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	32.696	204	270	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.0E-30	206	270	IPR003657	WRKY domain
SuperFamily	SSF118290	1.44E-25	207	270	IPR003657	WRKY domain
SMART	SM00774	1.6E-38	209	269	IPR003657	WRKY domain
Pfam	PF03106	1.6E-25	211	268	IPR003657	WRKY domain
SuperFamily	SSF103473	4.45E-20	1140	1349	IPR020846	Major facilitator superfamily domain
CDD	cd06174	1.55E-10	1147	1344	IPR020846	Major facilitator superfamily domain
Gene3D	G3DSA:1.20.1250.20	3.8E-6	1158	1351	No hit	No description
Pfam	PF00854	1.0E-86	1211	1623	IPR000109	Proton-dependent oligopeptide transporter family
SuperFamily	SSF103473	4.45E-20	1425	1662	IPR020846	Major facilitator superfamily domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006810	Biological Process	transport
GO:0016020	Cellular Component	membrane
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0005215	Molecular Function	transporter activity
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1669 aa Download sequence Send to blast
MCDYFSPKME GDHHNPAGDL ADIVRAGGVG LAELPSTATE WHLLAEPGTL FPPPQPSSSD 60 GHGFGDALAG LPDPFGLSDY RASSGRGAAD FEAPVGGRGG GGGGTLVDGG GGGVVLPRTM 120 QMPVLSPREI RPYPRIMGGD AVKLAIPTMM PGIAVGQPCA FDVVGGLQMP SPRGGGGGIK 180 RRKNQARNVI CIPAPAALAG GRTTGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG 240 CPARKQVERS RADPSMLVIT YNSEHNHPWP TQRNALAGST RSHHARNNGS NSSSSSSKQN 300 NSLQKQMVKA EPDQTAAAAT TTTSTSNGTP QATAVKEEEM IASEMEKRMQ QNATDHGTSV 360 ALDPGDLMQQ MFNQSYRPMI PEGGHHDDFF AELTELESNP MSLIFSREYM ETKPGGEPAG 420 KEMAAPNGLA DPLFEMLDWG ATIASVATSA GSSSLEQGES VGAYQCPRRT PCISQQFDLT 480 RHARTSDPFA NLQEASGCLS NLGRAVWEHA CTSNKRVSKT AFHRVLGERA RGRGLFAGRM 540 RCDMPAPSRR YRLYALRSGQ RKAMDKKGPA YTGGPRARVA ALNRMPTTEP GIPNGSRADH 600 RLARRPRAVS YRARPPGSFR AVDAPRSCPG RGRRSRQARM AANLPAVEAK HQVHRIHRRG 660 RTARHGTNNG TNRPRHTFAC QQLATDWSVS APKANQILSY ATRTRMANSV AALLVSAVEA 720 ERACFDAACQ CRGWGQQQSF TARGRVFVAT HGASVPWCGC RRSSSASQPT CNAWVMQMLH 780 WRKQTDDHKF SPLLPFLAPK QISTCPQHKK RTQATTPHPT WRPPTLVVPA AERRPGNVRA 840 WPRARARRRF FGADHAAACT AAPTARAQKL PAPAASGDRS TTGSPSAAPA HAAVSRGERV 900 LSSSSLACAI HYPPVLPCSG GESETRRHLA ELKRSRTRAP RLFYARRRRR GTNPPALTNL 960 HRGQGGVRDA TGCACAFAWR GRASYITRAA APQQGTNSAE EHSVPFPSKN HLALAAHSIR 1020 PIGMDSGDAM ERGEQALLLP EVNHHKHFPV LARCIRKALE RGQGHASFSI AAVGFPPNRV 1080 LFQRRFGDDT RSDADVERNV YKGTGAVDDE DTGVGGGSRS HGPKFQDESL QVPLLKDKKR 1140 RRSKAPAVVL GFECLESTAF NGIATNLVVY LETVLHGSNL ASATSVTTWI GTSYLTPIFG 1200 AIVADTFWGN YNTILVSLSV YLLGMMMVTF SAFLPTATVL GGSSVFGAQT VAFAGLYLVA 1260 VGSGGVRSSL LPFGAEQFDD DCPADQESKA SFFSWFYICV DFGMIVSGLF IVWIQENVSW 1320 GLGFGFSTAC IALAFGAFVL ATPMYKRRMP TGTPLKRLSQ VVVAACRKMS LKVPADAGPL 1380 FEVSDKVDAQ PKIAHTGEFS FLDKAAIISE SDLEEIAGEA GSSWKLCTVT QVEEFKILLR 1440 LLPIWATSII VSAAFSQLNT TFIQQGSAMN MSILSVPVAP ASMTSFEVVC VLAWVLLYSK 1500 VIVPALRAFS SSGDGEPSQL QRMGAGRLLM ALSMAISALV EMKRLDSAGH GQEISIAWQI 1560 PQYFFLAGAE VFVYIAQLEF FYEEAPDTMK STCTSLALLT VALGNYMSSL IYAVVEAFTA 1620 TADSPGWISD DLNKGHLDYF FWTMAAMCTL NFVVYSGFAK NYKLKTVLS

Sequence ? help Back to Top

Protein Sequence Length: 1669 aa Download sequence Send to blast

MCDYFSPKME GDHHNPAGDL ADIVRAGGVG LAELPSTATE WHLLAEPGTL FPPPQPSSSD  60
GHGFGDALAG LPDPFGLSDY RASSGRGAAD FEAPVGGRGG GGGGTLVDGG GGGVVLPRTM  120
QMPVLSPREI RPYPRIMGGD AVKLAIPTMM PGIAVGQPCA FDVVGGLQMP SPRGGGGGIK  180
RRKNQARNVI CIPAPAALAG GRTTGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG  240
CPARKQVERS RADPSMLVIT YNSEHNHPWP TQRNALAGST RSHHARNNGS NSSSSSSKQN  300
NSLQKQMVKA EPDQTAAAAT TTTSTSNGTP QATAVKEEEM IASEMEKRMQ QNATDHGTSV  360
ALDPGDLMQQ MFNQSYRPMI PEGGHHDDFF AELTELESNP MSLIFSREYM ETKPGGEPAG  420
KEMAAPNGLA DPLFEMLDWG ATIASVATSA GSSSLEQGES VGAYQCPRRT PCISQQFDLT  480
RHARTSDPFA NLQEASGCLS NLGRAVWEHA CTSNKRVSKT AFHRVLGERA RGRGLFAGRM  540
RCDMPAPSRR YRLYALRSGQ RKAMDKKGPA YTGGPRARVA ALNRMPTTEP GIPNGSRADH  600
RLARRPRAVS YRARPPGSFR AVDAPRSCPG RGRRSRQARM AANLPAVEAK HQVHRIHRRG  660
RTARHGTNNG TNRPRHTFAC QQLATDWSVS APKANQILSY ATRTRMANSV AALLVSAVEA  720
ERACFDAACQ CRGWGQQQSF TARGRVFVAT HGASVPWCGC RRSSSASQPT CNAWVMQMLH  780
WRKQTDDHKF SPLLPFLAPK QISTCPQHKK RTQATTPHPT WRPPTLVVPA AERRPGNVRA  840
WPRARARRRF FGADHAAACT AAPTARAQKL PAPAASGDRS TTGSPSAAPA HAAVSRGERV  900
LSSSSLACAI HYPPVLPCSG GESETRRHLA ELKRSRTRAP RLFYARRRRR GTNPPALTNL  960
HRGQGGVRDA TGCACAFAWR GRASYITRAA APQQGTNSAE EHSVPFPSKN HLALAAHSIR  1020
PIGMDSGDAM ERGEQALLLP EVNHHKHFPV LARCIRKALE RGQGHASFSI AAVGFPPNRV  1080
LFQRRFGDDT RSDADVERNV YKGTGAVDDE DTGVGGGSRS HGPKFQDESL QVPLLKDKKR  1140
RRSKAPAVVL GFECLESTAF NGIATNLVVY LETVLHGSNL ASATSVTTWI GTSYLTPIFG  1200
AIVADTFWGN YNTILVSLSV YLLGMMMVTF SAFLPTATVL GGSSVFGAQT VAFAGLYLVA  1260
VGSGGVRSSL LPFGAEQFDD DCPADQESKA SFFSWFYICV DFGMIVSGLF IVWIQENVSW  1320
GLGFGFSTAC IALAFGAFVL ATPMYKRRMP TGTPLKRLSQ VVVAACRKMS LKVPADAGPL  1380
FEVSDKVDAQ PKIAHTGEFS FLDKAAIISE SDLEEIAGEA GSSWKLCTVT QVEEFKILLR  1440
LLPIWATSII VSAAFSQLNT TFIQQGSAMN MSILSVPVAP ASMTSFEVVC VLAWVLLYSK  1500
VIVPALRAFS SSGDGEPSQL QRMGAGRLLM ALSMAISALV EMKRLDSAGH GQEISIAWQI  1560
PQYFFLAGAE VFVYIAQLEF FYEEAPDTMK STCTSLALLT VALGNYMSSL IYAVVEAFTA  1620
TADSPGWISD DLNKGHLDYF FWTMAAMCTL NFVVYSGFAK NYKLKTVLS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4oh3_A	5e-88	1147	1665	35	569	Nitrate transporter 1.1
4oh3_B	5e-88	1147	1665	35	569	Nitrate transporter 1.1

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	103	GGRGGGGGG
2	1134	1140	LKDKKRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc01511.1.g00020.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	3e-58	WRKY DNA-binding protein 35