PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01499.1.g00160.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 307aa    MW: 33931.3 Da    PI: 7.0045
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01499.1.g00160.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.71e-10121302127
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                                   ppG+ F+Ptdeel+ + L ++  gk+ ++  +i e   +k+ P  +p  +  +++   f+++ ++  a  +r++r  + g 
  Zpz_sc01499.1.g00160.1.am.mk  12 PPGLIFDPTDEELIEHCLLPRSLGKPETFPGIIVED--NKTTPL-MP-LI--DDQLPAFYVRDERPDA--RRSRR-CDGGG 83 
                                   8*************************8886666553..566664.23.22..4455578888877544..45555.68899 PP

                           NAM  83 Wkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyr 127
                                   W++  k+++  ++      ++e+ ++++ L f+  +     +  Wvm ey 
  Zpz_sc01499.1.g00160.1.am.mk  84 WRKIQKSESKDDRhvliidGREVRWTRNNLNFHLDSG----SVGWVMYEYF 130
                                   *998885554444455556778899********5443....568******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-1710144IPR003441NAC domain
PROSITE profilePS5100514.71711150IPR003441NAC domain
PfamPF023651.1E-1112129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MSPAKFLGDD HPPGLIFDPT DEELIEHCLL PRSLGKPETF PGIIVEDNKT TPLMPLIDDQ  60
LPAFYVRDER PDARRSRRCD GGGWRKIQKS ESKDDRHVLI IDGREVRWTR NNLNFHLDSG  120
SVGWVMYEYF IDDSPSLKVC RISFSGSKKR ARQLDGHGNG SLAGEPVTQR RRVTDAAGSG  180
PADSTTTSRR RSIKTSARRT LRRIMNDILS ASGMPAMPMP IHNSSAGLDP VNIICDVEFQ  240
ALLATADAAM APFRVSFNHE EEFSAAPDSP STDSGSMNVL CSLTVVRGSA RPSHVELIGQ  300
QAHWLPQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01499.1.g00160.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946