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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc01432.1.g00070.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
bHLH |
| Protein Properties |
Length: 429aa MW: 46091.4 Da PI: 6.8314 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01432.1.g00070.1.am.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 38.8 | 1.7e-12 | 180 | 231 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r +h ++Er+RR+++N+ ++ Lr+l+P + + + + a+i+ A++++k+L+
Zpz_sc01432.1.g00070.1.am.mk 180 QRITHIAVERNRRRQMNEYLAVLRSLMPDS---YVHRGDQASIVSGAIDCVKELE 231
799***************************...9******************995 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MNCVDSCKLV KISWSIRLRG EGDLAIHATG RLKHFLAAAA APTACPSTKL ALSFTSDSAI 60
CMPDSTAAQL TRARALSYAM LYTSTIDMTL QEALCAPSSD VLIYDTFNAA ACAPSATGSF 120
LVVGNGATEA MALPVPMEVP VAAPTPAQEA EGETRAVHQG RRKRRRRERS VKNHEDAENQ 180
RITHIAVERN RRRQMNEYLA VLRSLMPDSY VHRGDQASIV SGAIDCVKEL EQQLQSLEAQ 240
KRALLAAQHQ QKRNSMAVER DTAQMPMSNS PANGAAGEKG EEEEEAAPAS PPPFSRFFRY 300
PQYVWLHARP REDGAEEASR ASGVADVEVS VVVDAHASVR VMAPRRPGQL HKMVAGLQAL 360
GLAVLHLNVT AADAVVLYTL SLKVEEGCAL TAADEIAAAV HHVMCIIEAE ATTQQRVLAA 420
GVGQTPGLS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 154 | 166 | RAVHQGRRKRRRR |
| 2 | 160 | 166 | RRKRRRR |
| 3 | 160 | 167 | RRKRRRRE |
| 4 | 161 | 165 | RKRRR |
| 5 | 161 | 168 | RKRRRRER |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT061323 | 6e-76 | BT061323.1 Zea mays full-length cDNA clone ZM_BFb0135D07 mRNA, complete cds. |
| GenBank | KJ727845 | 6e-76 | KJ727845.1 Zea mays clone pUT5889 bHLH transcription factor (bHLH134) mRNA, partial cds. |
