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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc01429.1.g00170.1.am.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
GeBP |
Protein Properties |
Length: 399aa MW: 41675.3 Da PI: 4.7662 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01429.1.g00170.1.am.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 98.9 | 4.8e-31 | 86 | 185 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkep 78
lfqrlw++e e+++L+G++df+a++g+ +++ d+ fye +++++sf++sksql+eK+rrLKkK++ + ++ ++g +
Zpz_sc01429.1.g00170.1.am.mk 86 LFQRLWTDEEELLILRGFLDFTARRGTtfASHQyDTGPFYEEIRRRLSFDFSKSQLIEKLRRLKKKYRVCAARmGAQGAAF 166
79************************99877778*************************************99899***** PP
DUF573 79 sfskehdqkifelskkiWg 97
+f+++h+ i+++++ iW+
Zpz_sc01429.1.g00170.1.am.mk 167 AFRSAHEGAIYDVARHIWR 185
******************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MAGADDPAAA AAAASSSAGD EDDEGTDTDA SNSDRAAPQD QDPDRQLLAD NAAPAPSPPA 60 AAAPEPTGAV APPPQPAAAT DDSRRLFQRL WTDEEELLIL RGFLDFTARR GTTFASHQYD 120 TGPFYEEIRR RLSFDFSKSQ LIEKLRRLKK KYRVCAARMG AQGAAFAFRS AHEGAIYDVA 180 RHIWRPAVRR DGGQGGGGDA SDEDDINPAA ATAASAALPG VVDDGAGGSA SAHTPRAKGG 240 RRVRRKTAEE LEPQALPTTT SPLILNDVAR QPLVVAVDNL TPTNSQLPVL APSPAPAASG 300 ATEEAVRAIL SPLLRELVSS VTVAGQTGLG LGLNMGFGGI GGVDILGPGL GGGVSVHGSS 360 GDEKWRRQQI LELEVYLKRI ELVREQVAAA LEELRSSEG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT065406 | 1e-133 | BT065406.1 Zea mays full-length cDNA clone ZM_BFb0145O21 mRNA, complete cds. |
GenBank | JX428457 | 1e-133 | JX428457.1 Zea mays subsp. mays clone pUT3052 GBP21 GeBP type transcription factor mRNA, partial cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 4e-29 | DNA-binding storekeeper protein-related transcriptional regulator |