PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01403.1.g00070.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 300aa    MW: 31241.8 Da    PI: 6.2421
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01403.1.g00070.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.18.5e-19100157159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ldDg++WrKYGqK +++se+pr    Ct+    gC+++k+v+ s+++p+  ++ Y g+H+++
  Zpz_sc01403.1.g00070.1.sm.mk 100 LDDGHAWRKYGQKRIHDSENPR----CTHMpdqGCKARKQVQVSDSNPSEYVVSYFGQHTCR 157
                                   59*******************6....9998888**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.4E-2093159IPR003657WRKY domain
SuperFamilySSF1182902.48E-1994159IPR003657WRKY domain
PROSITE profilePS5081117.21395159IPR003657WRKY domain
SMARTSM007743.6E-28100158IPR003657WRKY domain
PfamPF031062.5E-17101157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MASPGSSGDR SPAVPRKVLD DLLGVHKRAA MLQTMVDGSP AAARELVDGM MTRVTNALTT  60
ALNTSGVVVD GVEWSSLGSR GWPGGRRDSA GAVTVTTTTL DDGHAWRKYG QKRIHDSENP  120
RCTHMPDQGC KARKQVQVSD SNPSEYVVSY FGQHTCRDPS TVPIVIDAPM NLSNFISFGG  180
STAATSAAHA VPPRRQQAVA PTTMRSRLAG YISSSLPAAA EQRCRSEEAI SLAGELGAVV  240
AGALSNAGRT TVGSAPEFDV LLDGGIDTAG SFPSSPSSLG GFMTGSFGSF GDDDFFGFDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-2194157269OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01403.1.g00070.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802431.12e-77uncharacterized protein LOC112881781
TrEMBLA0A3L6QUJ92e-76A0A3L6QUJ9_PANMI; Putative WRKY transcription factor 38
STRINGSi030395m1e-69(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125272837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.18e-21WRKY DNA-binding protein 46