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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc01334.1.g00060.1.sm.mkhc |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB_related |
Protein Properties |
Length: 291aa MW: 31675.3 Da PI: 9.5249 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01334.1.g00060.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 31.2 | 5.2e-10 | 5 | 34 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30
++rWT+eE+ l+ +v+++G+g W+tI r
Zpz_sc01334.1.g00060.1.sm.mkhc 5 KQRWTAEEEAALKAGVARHGPGKWRTILRD 34
79*************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MGAPKQRWTA EEEAALKAGV ARHGPGKWRT ILRDPDFGPL LSLRSNVDLK VDPAARRGSR 60 GGSAGRFCEF AGDKWRNLSV TAGGYGSREK ARMALKKGRH VPKVPAESME VDEYHMDNVH 120 NAFLDVQPLA MVVEPLQLGD SPDKSVVRLD EIILEAIKNL KKASGSNKAA IASYIEVNQK 180 YRIAPTSPSL GGKSTKLYSM EEMNRENNVK QLAKPQVDSK LEKMRSMTKE EAAVFAAKAV 240 AEAEVAIAEA EEAARVAEAA EADAEAAKVF LEAVTVTIRN RNVASMMLRA C
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Functional Description ? help
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Source |
Description |
UniProt | Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HF679460 | 1e-46 | HF679460.1 Saccharum hybrid cultivar Co 86032 mRNA for ScMYB54 protein. |