 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zpz_sc01322.1.g00170.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 237aa MW: 26424.7 Da PI: 6.3054 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01322.1.g00170.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59 | 7.9e-19 | 61 | 114 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++++eq + Le F+k+r++ + ++ +LA++lgL+ +qV vWFqNrRa++k
Zpz_sc01322.1.g00170.1.sm.mkhc 61 KKRRLSDEQARLLEMSFRKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHK 114
56689***********************************************99 PP
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| 2 | HD-ZIP_I/II | 111.9 | 4.2e-36 | 61 | 152 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerL 80
kkrrls+eq++lLE+sF++e+kLe+ rKv+la eLgl+++qvavWFqnrRAR+k+k +E+++++L++a+da++ +n++L
Zpz_sc01322.1.g00170.1.sm.mkhc 61 KKRRLSDEQARLLEMSFRKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRAAHDAVVLRNCHL 139
9****************************************************************************** PP
HD-ZIP_I/II 81 ekeveeLreelke 93
++e+ +L+++l+e
Zpz_sc01322.1.g00170.1.sm.mkhc 140 QTEMLKLEDRLAE 152
********99876 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MGCEGEERML FPSSFAFVPA ESFAEAADTS GSSGEQKKAR QRRRRKPKPA PEDQAGDEQA 60
KKRRLSDEQA RLLEMSFRKE RKLETPRKVQ LAAELGLDAK QVAVWFQNRR ARHKSKLMEE 120
EFAKLRAAHD AVVLRNCHLQ TEMLKLEDRL AEAEEEKKKL ITAAAAAAAA TGAADTSSPS 180
SSSFSTVTCN PAALLGQQFG VEDEVADFSY MSQYAYNDYL MDFAACYFGG VVYDQFN
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 43 | 63 | RRKPKPAPEDQAGDEQAKKRR |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
