PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01284.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family BES1
Protein Properties Length: 280aa    MW: 30395.3 Da    PI: 10.09
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01284.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822119.93.5e-37146217273
                        DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgs 73 
                                   g gr++  +E+E++k+RER+RRa++ +i+aGLR++Gny l++raD+neV++AL+reAGwvv +DGtt++ + 
  Zpz_sc01284.1.g00020.1.am.mk 146 GVGRRRAREEKERTKLRERQRRAVTGRILAGLRQHGNYSLRARADINEVIAALAREAGWVVLPDGTTFPSSA 217
                                   7799****************************************************************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.6E-34147219IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MGTRVRVRLR ADPLASTADP IICGPCVAGG RRRFGARAWA PSPPSISPHV ARPTRAPRQP  60
YHAAARLARA NGTLGRRGPD PGREMQQGYE EMGVKDEEGE EEDDEEEDDY FVDDDAAAGP  120
GRYLLQASPV AVAPPPVAGA GSPAGGVGRR RAREEKERTK LRERQRRAVT GRILAGLRQH  180
GNYSLRARAD INEVIAALAR EAGWVVLPDG TTFPSSAAAA SQVCSFPLPP ALPDQLETGH  240
GRHWQARLWL ARPPFPPPED ALRHHRLLPG LSLRIRSLTT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01284.1.g00020.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0639009e-71BT063900.1 Zea mays full-length cDNA clone ZM_BFc0118E07 mRNA, complete cds.
GenBankBT0848299e-71BT084829.2 Zea mays full-length cDNA clone ZM_BFb0189B17 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB6U7M68e-36B6U7M6_MAIZE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1969568
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.18e-30beta-amylase 7