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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zpz_sc01257.1.g00200.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
NAC |
| Protein Properties |
Length: 226aa MW: 24881.8 Da PI: 5.2588 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01257.1.g00200.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 99.9 | 3.7e-31 | 30 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79
lppGf+F P+deelvv++L++k++ +++ + v++ev ++ +Pw+L+ k+ + ++wyfFs++ ++r+t
Zpz_sc01257.1.g00200.1.sm.mkhc 30 LPPGFHFFPSDEELVVHFLRRKASLLPCQRDVVVPEVLPNQQDPWELDGKALQAGNQWYFFSHAT--------QSRVTP 100
79****************************778**************966667789******975........5799** PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyrl 128
+gyW+ d+ v s +g +vg+k+tLvf gr g+ +t+Wvmhey+l
Zpz_sc01257.1.g00200.1.sm.mkhc 101 NGYWNPVCDDEMVSS-GGGNVGIKRTLVFSLGRPCGGThETNWVMHEYHL 149
*********999999.9999**********9999887648********98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MSDSRLPPAS SPSTSSSFAP HLAMVGPSDL PPGFHFFPSD EELVVHFLRR KASLLPCQRD 60
VVVPEVLPNQ QDPWELDGKA LQAGNQWYFF SHATQSRVTP NGYWNPVCDD EMVSSGGGNV 120
GIKRTLVFSL GRPCGGTHET NWVMHEYHLL DGSCKGSGGG TSSSSKRLHK KKSHSEIECN 180
NWVICRVFDS SCGSQVSFQD EGMELSCLDE VFLSLDDYDE VSLPNK
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-31 | 30 | 195 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-31 | 30 | 195 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-31 | 30 | 195 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-31 | 30 | 195 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 7e-31 | 30 | 195 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 7e-31 | 30 | 195 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 7e-31 | 30 | 195 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 7e-31 | 30 | 195 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 7e-31 | 30 | 195 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 7e-31 | 30 | 195 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 7e-31 | 30 | 195 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 7e-31 | 30 | 195 | 20 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 8e-31 | 30 | 195 | 17 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 8e-31 | 30 | 195 | 17 | 170 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that influences tracheary elements and xylem development by negatively regulating secondary cell wall fiber synthesis and programmed cell death. {ECO:0000269|PubMed:18069942, ECO:0000269|PubMed:20458494}. |
