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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc01172.1.g00010.1.sm.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
M-type_MADS |
Protein Properties |
Length: 107aa MW: 11732.6 Da PI: 10.1644 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01172.1.g00010.1.sm.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 84.3 | 7.2e-27 | 42 | 91 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
rie+ + rqvtfskRr g+lKKA+ELSvLCdaev +i+fs++ +ly ++s
Zpz_sc01172.1.g00010.1.sm.mk 42 RIEDATSRQVTFSKRRSGLLKKAFELSVLCDAEVGLIVFSPRSRLYQFPS 91
8***********************************************96 PP
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3kov_A | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3kov_B | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3kov_I | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3kov_J | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3mu6_A | 6e-18 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3mu6_B | 6e-18 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3mu6_C | 6e-18 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3mu6_D | 6e-18 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3p57_A | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3p57_B | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3p57_C | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3p57_D | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3p57_I | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
3p57_J | 1e-17 | 28 | 92 | 1 | 59 | Myocyte-specific enhancer factor 2A |
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that promotes flowering, especially in response to vernalization by short periods of cold, in an FLC-inpedendent manner. {ECO:0000269|PubMed:16778081}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Maintained at very low levels by the polycomb-group (PcG) proteins MSI1, CLF, and EMF2 via histone methylation (H3K27me3). Derepressed upon cold treatment (vernalization). {ECO:0000269|PubMed:16778081}. |