PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01145.1.g00110.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 507aa MW: 55010.2 Da PI: 10.7262 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.9 | 2.9e-10 | 364 | 423 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR++A +s +RK +++ eLe++v +L+ e ++L+ ++e+ + e+ +lk+++ Zpz_sc01145.1.g00110.1.am.mk 364 PKRVKRILANRVSAAKSKERKVKYMGELERRVHVLQMETSTLAAKVEREQRESVALKTQN 423 5999********************************************999999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-13 | 361 | 425 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 363 | 426 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-9 | 365 | 422 | No hit | No description |
SuperFamily | SSF57959 | 6.47E-10 | 365 | 421 | No hit | No description |
Pfam | PF00170 | 5.7E-9 | 365 | 423 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 3.49E-20 | 366 | 415 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence Send to blast |
MRAGSHLLPS ARHFPFSRTG ARPRFTFCFC ARCLPFAFPL PSPSPSRRRH FTAPLRPSPP 60 RATEMDDGRG DPARRRLLSP PAGGQGQGLR LPPRAPATDL YSQFQRRFSH SLFLPPPMVP 120 RFPSAASGSG SAFSYYQGTP GLSQPPFFSV DHQRPFIYAG QAAGAVTSSP LSLGAEQGPS 180 SVLPPRGAGH RRSRSDFLFG LSRPNMSVPV PPAVEAAALD SVFGSYRVMG TLGSVVNGAE 240 ERHDHARFPR LWIPANSSDN KAENLAAAGV RGAGPSNPRH CRSLSADSFM GNLNFETVGQ 300 ESPNLPLTSP AAGNGAGLSR TGSGPFGGPS APTDLVIPNG EFSEADRKKI MANDHLAEIA 360 QTDPKRVKRI LANRVSAAKS KERKVKYMGE LERRVHVLQM ETSTLAAKVE REQRESVALK 420 TQNNEMRIRV QALEQHAQLK DALNEAMRAE VQRLKHAIGE TIDPHAPNSA NLHLGCQMTP 480 QQLLQLQEQP PEAQLALQQQ KPQEETS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01145.1.g00110.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025803483.1 | 1e-132 | transcription factor RF2a-like | ||||
TrEMBL | A0A3L6QQY6 | 1e-134 | A0A3L6QQY6_PANMI; Uncharacterized protein | ||||
STRING | Pavir.J03608.1.p | 1e-136 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14870 | 18 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 2e-48 | bZIP family protein |