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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc01135.1.g00140.1.sm.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
GeBP |
Protein Properties |
Length: 383aa MW: 40550.2 Da PI: 5.4788 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01135.1.g00140.1.sm.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 102.6 | 3.2e-32 | 75 | 174 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkep 78
lfqrlw++eDeiv+L+++ +f+a++g+ +++ d++ fye ++++++ ++ksqlveK+rrLK+K++++v++ + g ++
Zpz_sc01135.1.g00140.1.sm.mk 75 LFQRLWTDEDEIVILRAFAEFTAQRGTafASHQyDTTPFYEDMRGRLQTGFTKSQLVEKLRRLKRKYRNCVDRlRVAGPSF 155
69*************************9977778***************************************88899*** PP
DUF573 79 sfskehdqkifelskkiWg 97
sf+++h+q ife+++ iW+
Zpz_sc01135.1.g00140.1.sm.mk 156 SFRSPHEQAIFEIARTIWR 174
******************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MFPMVDDPSA AAGGGAMVSS SFPDADAYGN GNGDSEDIDF PAGPNSHASF SAAPATTAAT 60 SAGAGGPGSG ERRALFQRLW TDEDEIVILR AFAEFTAQRG TAFASHQYDT TPFYEDMRGR 120 LQTGFTKSQL VEKLRRLKRK YRNCVDRLRV AGPSFSFRSP HEQAIFEIAR TIWRPGSDKH 180 GRDSDDEGNE DALAVDAAAA AAAAAAGARV NGDSARSPSS RSRRGRRRRK GDFPATDTAE 240 ALPPAPMPAM TTEDALPSFP QPTAMDGGTI TMDPAAAGLP AVLSAAATVA TPGTAENPIL 300 ASLFKEMIRS MLNISSSSAP LGLEPPPPAI PGMPMDGEKW RQQRILELEV YLRRIALLQD 360 QAQAALEELR SAPPHHGAGG MNT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT087680 | 1e-129 | BT087680.1 Zea mays full-length cDNA clone ZM_BFb0156A22 mRNA, complete cds. |
GenBank | EU954230 | 1e-129 | EU954230.1 Zea mays clone 1459363 hypothetical protein mRNA, complete cds. |
GenBank | JX428520 | 1e-129 | JX428520.1 Zea mays subsp. mays clone pUT3119 GBP18 GeBP type transcription factor mRNA, partial cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 2e-31 | DNA-binding storekeeper protein-related transcriptional regulator |