|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zpz_sc01121.1.g00040.1.am.mk |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
Trihelix |
Protein Properties |
Length: 312aa MW: 35319.3 Da PI: 6.1405 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01121.1.g00040.1.am.mk | genome | ZGD | View Nucleic Acid |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 61.4 | 2.2e-19 | 23 | 109 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkrtse 74
W++ e+++Li+a++e++++lrrg+lk+++Weev++ + +++ +qC++k+e+l+kry+ + ++
Zpz_sc01121.1.g00040.1.am.mk 23 WSHVETMHLIDAYEERWTALRRGQLKAHQWEEVAAEVaarcaatpGVNVQHKTGTQCRHKLEKLRKRYRTEGARPVT---- 99
*************************************999996644444488*****************98877764.... PP
trihelix 75 ssstcpyfdqle 86
s +pyf++++
Zpz_sc01121.1.g00040.1.am.mk 100 --SLWPYFRRMD 109
..68*******8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MAQDADESPR RPALKKSAPA QPWSHVETMH LIDAYEERWT ALRRGQLKAH QWEEVAAEVA 60 ARCAATPGVN VQHKTGTQCR HKLEKLRKRY RTEGARPVTS LWPYFRRMDR LERGPGATSS 120 ANPPAAESPP AGASDEEEVQ EEEEEEDEEE EEEELIPRNN NTRSINGIIR EFGSGLAPRH 180 PQLQQPPPSI TPSTAPPRKR VSYEAFQARA AAAEAEKVKE DEVEMARRPF RYGGANAELS 240 AVLRDFSEGF MRLERRRMEV QWEIEQGWKE TEARQTRMLQ DAQHGLRDTI AVACAVPPKK 300 ARRDHGSNGD GF
|