 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc01112.1.g00180.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WRKY |
| Protein Properties |
Length: 413aa MW: 44630.3 Da PI: 7.1009 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01112.1.g00180.1.sm.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.5 | 1.8e-30 | 182 | 238 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+ kg+e prsYY+Ct +gCpvkk vers d+ ++eitY+g+Hnh+
Zpz_sc01112.1.g00180.1.sm.mk 182 KDGYSWRKYGQKQLKGAESPRSYYKCTREGCPVKKVVERSF-DGFITEITYKGRHNHP 238
8****************************************.***************8 PP
|
| 2 | WRKY | 103.3 | 1.4e-32 | 313 | 371 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg++ prsYY+Ct +C+v+k++er+++dp++v +tY g+Hnh+
Zpz_sc01112.1.g00180.1.sm.mk 313 LDDGYRWRKYGQKVVKGNPRPRSYYKCTADNCNVRKQIERASTDPRCVLTTYAGRHNHD 371
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MDDRRGRGGD AMRHRPFASA QERVFDGGGA GPSFGGDFDQ GSSYMELLSA GVNPQPPPPL 60
PQWAVEEMAA APAINLVPQS FSTANFTSSS SSYQHPASFA AVSPLSYSTQ PYAPLYLQQT 120
DLPPTQWHPR PAIMSAASSY LPPNFSFLPA AAHNNQLQQH VVHLRGGAGG QPSPAVIEQP 180
AKDGYSWRKY GQKQLKGAES PRSYYKCTRE GCPVKKVVER SFDGFITEIT YKGRHNHPRP 240
PQRGNDGDVP AGIIAEEALD GQSDHDDDED VLHEDHDGDE GHRAMGADGT VAGQRVVKKP 300
KIILQTPSDV DLLDDGYRWR KYGQKVVKGN PRPRSYYKCT ADNCNVRKQI ERASTDPRCV 360
LTTYAGRHNH DPPGQGPDAA AAPGGASAHH PAAAGGSGMF QQTGGSRQLK EES
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK363803 | 2e-82 | AK363803.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2019A07. |
