PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01105.1.g00100.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 97aa    MW: 10521.8 Da    PI: 10.0313
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01105.1.g00100.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.13e-22360258
                                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSS.TTEEEEEEES--SS CS
                          WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaed.pkvveitYegeHnh 58
                                  +Dgy+W+KYGqK +k+ +  rsY+rC ++ C +kkkve    d +  v ++Yeg H+h
  Zpz_sc01105.1.g00100.1.sm.mk  3 EDGYEWKKYGQKFIKNIQKMRSYFRCRHKLCGAKKKVEWLPGDaGGDVRVVYEGAHQH 60
                                  7**************************************998834679********** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.511163IPR003657WRKY domain
SuperFamilySSF1182902.09E-20263IPR003657WRKY domain
SMARTSM007742.7E-23262IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-22263IPR003657WRKY domain
PfamPF031069.2E-21360IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MPEDGYEWKK YGQKFIKNIQ KMRSYFRCRH KLCGAKKKVE WLPGDAGGDV RVVYEGAHQH  60
GSPPSAPGSG QGGSGGGGGA ANQYELRAQY FGGSRSL
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01105.1.g00100.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9706336e-60EU970633.1 Zea mays clone 348246 hypothetical protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004982253.14e-43probable WRKY transcription factor 33
TrEMBLA0A3L6S8311e-44A0A3L6S831_PANMI; Putative WRKY transcription factor 33
STRINGSi038001m2e-42(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.12e-14WRKY DNA-binding protein 13