PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01076.1.g00130.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 436aa MW: 48084.2 Da PI: 6.8271 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.1 | 1.7e-27 | 320 | 370 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k r+rWt++LHerFv++v+ LGG+ekAtPk il++m+ gLt++h+kSHLQ Zpz_sc01076.1.g00130.1.am.mk 320 KMRIRWTQDLHERFVDCVNMLGGAEKATPKGILNMMNHAGLTIYHIKSHLQ 370 67************************************************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.03 | 317 | 377 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 5.02E-13 | 318 | 371 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.1E-23 | 319 | 370 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.7E-19 | 320 | 371 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.0E-7 | 324 | 370 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.4E-7 | 367 | 395 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence Send to blast |
MGLLRLVALK QNCPLHSNGK SDISPLPKKP TVTGCASGGR ELTRVSCNSG RHERPRILPC 60 LLWGSPSKDW YCLLVQFPNF VSPDTKKNIK LCDYNYGSSL CERPLLSGTA PWLSFYAGLV 120 SSVPQRHAAA GSLMRNEYIS SARSVLATLG NSVVGFDNSE FSFEHLLGMA PLDCAPGSTT 180 PSTVVALGTA PFGRSPETEQ LYRSVDPPLL RDDSVMTYHV PPLHLDAEES PPVKMPLQQL 240 DRRQGVFQNA STDKLIVRDH AILSISPHVR SGDCTLLPAM EAPSVQSTME NPLPRIYNIN 300 APAIHTGTIA MAPRQGVPSK MRIRWTQDLH ERFVDCVNML GGAEKATPKG ILNMMNHAGL 360 TIYHIKSHLQ IQTNLQLRIE AQGKVLQKML EEQLEASRSM LELDPWEEMM RGVGAVFPLD 420 GEQQEDVFDD VELLQT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 6e-18 | 320 | 370 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 6e-18 | 320 | 370 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 6e-18 | 320 | 370 | 1 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 6e-18 | 320 | 370 | 1 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 6e-18 | 320 | 370 | 1 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 6e-18 | 320 | 370 | 1 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 6e-18 | 320 | 370 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 6e-18 | 320 | 370 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 6e-18 | 320 | 370 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 6e-18 | 320 | 370 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 6e-18 | 320 | 370 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 6e-18 | 320 | 370 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01076.1.g00130.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025822779.1 | 1e-107 | probable transcription factor KAN2 | ||||
Refseq | XP_025822780.1 | 1e-107 | probable transcription factor KAN2 | ||||
TrEMBL | A0A2T7D1E3 | 1e-106 | A0A2T7D1E3_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A3L6PZL8 | 1e-106 | A0A3L6PZL8_PANMI; Uncharacterized protein | ||||
STRING | Si022099m | 2e-99 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6933 | 37 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 9e-23 | G2-like family protein |