PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01074.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 535aa    MW: 57892.3 Da    PI: 9.7841
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01074.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.71.9e-31237292156
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                                   k r++W+peLH++Fv a+++LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Zpz_sc01074.1.g00030.1.am.mk 237 KSRRCWSPELHRQFVAALNKLGGPQVATPKQIRELMKVEGLTNDEVKSHLQKYRLH 292
                                   68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.021234294IPR017930Myb domain
SuperFamilySSF466895.32E-17235295IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-28235295IPR009057Homeodomain-like
TIGRFAMsTIGR015579.9E-26237292IPR006447Myb domain, plants
PfamPF002494.3E-7239290IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    Send to blast
MGLDVGEIGM GADLSLDLRH FASKAMKQTG SAQASDMDAY IRRLEEERGK IEVFRRELPI  60
CARLLADAID VMKEEAEKEK KNDHKEEEEE DGAAGDKSKW MSTAQLWTSG SGREAAEPEK  120
QESDKGRRSS EQKSFSGGAL TLFNAVASGA PSSRQRPRLR NNDDKAADVG MPDLSLLSPP  180
PITGVPAAAA DESRRLVVGL ATAAARASGM VPSAGGPTLF LPPQVKQTTP QQQQARKSRR  240
CWSPELHRQF VAALNKLGGP QVATPKQIRE LMKVEGLTND EVKSHLQKYR LHTRRTPSGP  300
AVVSQPIVLV GGLWIPHQEH SQSGSQSQSS GSPQGPLHFS PASGVATASC EEEASAAGFG  360
QSYSFRPEKL SYTTVDFSRL INGLRAASIR GSWTPGFVRP GSTKLSLKAS QERRRAMLAC  420
VLLVGSGLHE ICLLEAATGR FGVGLGLGTA TNATSPLQPP QALDFWELDP GPPTDNKRST  480
FYGLDKKGAD CGCVRRGAAR RNRNGERERL RRKDVRCRAR SGEAEMRCGD PMARY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-14237290154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-14237290154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-14237290154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-14237290154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01074.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519326e-58JF951932.1 Triticum aestivum clone TaMYB49 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002459272.21e-129transcription factor HHO2
TrEMBLA0A0A9H2111e-131A0A0A9H211_ARUDO; Uncharacterized protein
STRINGSb02g001600.11e-129(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.13e-41G2-like family protein