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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc01072.1.g00220.1.sm.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 230aa MW: 23823.3 Da PI: 4.0865 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc01072.1.g00220.1.sm.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.6 | 2.3e-16 | 27 | 75 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykGVr ++ +g+Wv+e+r p g+++r++lg++ tae Aa+a++aa ++l+g
Zpz_sc01072.1.g00220.1.sm.mk 27 YKGVRMRS-WGSWVSEVRAP---GQKTRIWLGSHSTAEAAARAYDAALLCLKG 75
9****998.*******9998...557************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MVKTAASDDT AGAAKTQHGG GGRKGTYKGV RMRSWGSWVS EVRAPGQKTR IWLGSHSTAE 60 AAARAYDAAL LCLKGSAAAA DLNFPVRLPF DLPAAAMSPK EIQRVAAAAA AGNAGGDRAF 120 GACTGTDDVD DGSAVSGDSA SAVSSPESTV TSETEPEPEA ACCHGDVLDY GLLADIDAFF 180 PSPECMEYAM MDPCSTFFAP APMAAMSDDD VFWEDQEGDI ALWSFSTLDC
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004687 | 5e-78 | AP004687.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0021C04. |
GenBank | AP014962 | 5e-78 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
GenBank | CP012614 | 5e-78 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |