PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01067.1.g00250.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 250aa MW: 27600.3 Da PI: 8.668 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 61 | 2.2e-19 | 211 | 249 | 1 | 38 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v Zpz_sc01067.1.g00250.1.sm.mkhc 211 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPVRKQV 249 58***************************99*******9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.6E-19 | 196 | 250 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-17 | 204 | 250 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.599 | 206 | 250 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-9 | 211 | 250 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.8E-17 | 212 | 250 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MELATKRTSS NAKAHQSKVQ EDKLASTRAE MCGVREENEM LKKMLSRVVE DYRSLQMHFQ 60 EVSQQEQFKK PGVPMATSPT SIEEPGLVSL SLGASTSMHR KEDKSSMVLE DKGREELTTI 120 KESGLSLGLP DCKVGATNSA KVQPNVLTLS PEGSSEDAID DAIETTNQWP PRKTQKNLRS 180 EGADVEDDTG PLPQVKKARV SVRARCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA 240 AGCPVRKQVK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01067.1.g00250.1.sm.mkhc |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004964541.1 | 1e-120 | probable WRKY transcription factor 72 | ||||
Swissprot | A0A3Q7GFB5 | 6e-61 | WK72A_SOLLC; WRKY transcription factor 72A | ||||
TrEMBL | A0A368QQA3 | 1e-119 | A0A368QQA3_SETIT; Uncharacterized protein | ||||
STRING | Pavir.Db02233.1.p | 1e-115 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5047 | 38 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 2e-49 | WRKY DNA-binding protein 72 |
Publications ? help Back to Top | |||
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