 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zpz_sc01047.1.g00010.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 235aa MW: 26203 Da PI: 4.92 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01047.1.g00010.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.4 | 4.9e-18 | 49 | 102 | 4 | 56 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ft+eq++ Le+ F+ ++ +e++eLA+++gL+ rqV +WFqN+Ra+++
Zpz_sc01047.1.g00010.1.sm.mkhc 49 KRRFTEEQVRSLETTFHArRAKLEPKEKAELAREMGLQPRQVAIWFQNKRARWR 102
458**************8899********************************9 PP
|
| 2 | HD-ZIP_I/II | 118 | 5.2e-38 | 47 | 140 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeene 78
e+krr+++eqv++LE++F++++ kLep++K+elare+glqprqva+WFqn+RAR+++kqlE+dy+ L+++ydal++ e
Zpz_sc01047.1.g00010.1.sm.mkhc 47 ERKRRFTEEQVRSLETTFHARRaKLEPKEKAELAREMGLQPRQVAIWFQNKRARWRSKQLEHDYADLRARYDALRDLVE 125
69*****************9999******************************************************** PP
HD-ZIP_I/II 79 rLekeveeLreelke 93
+L++e+ +L+++l+e
Zpz_sc01047.1.g00010.1.sm.mkhc 126 SLKQEKVALAAQLDE 140
**********99976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MERDCQFLVP PPPQHQHEDQ LLHQLMMVGD QDPVGAAGMR GGGGGGERKR RFTEEQVRSL 60
ETTFHARRAK LEPKEKAELA REMGLQPRQV AIWFQNKRAR WRSKQLEHDY ADLRARYDAL 120
RDLVESLKQE KVALAAQLDE LKGRLNEPQD QSGSSCNITG GTASFDVDDK RNNNSSVSSQ 180
DDGAMAPAVA TSEDSTAAGY YDDHAVAYGG GLPDPFCNPP ELWDTWPLLE WNAVA
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK063685 | 1e-112 | AK063685.1 Oryza sativa Japonica Group cDNA clone:001-119-F01, full insert sequence. |
| GenBank | AK287604 | 1e-112 | AK287604.1 Oryza sativa Japonica Group cDNA, clone: J065054D22, full insert sequence. |
| GenBank | EU847515 | 1e-112 | EU847515.1 Oryza sativa Japonica Group clone OsHD6B homeobox leucine zipper protein mRNA, complete cds. |
