 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc01042.1.g00250.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
bHLH |
| Protein Properties |
Length: 399aa MW: 42953.2 Da PI: 6.5529 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc01042.1.g00250.1.am.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 44 | 3.9e-14 | 65 | 116 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P+a + ++ + a+i+ A+e++k+L+
Zpz_sc01042.1.g00250.1.am.mk 65 QRMTHIAVERNRRRQMNEYLAVLRSLMPEA---YVQRGDQASIVGGAIEFVKELE 116
79****************************...*******************995 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MSALVDALCA PSSDAALIFD PLNAASAASF LFDNAAFCDA GIALGAAPRR RRARSCKSME 60
EAESQRMTHI AVERNRRRQM NEYLAVLRSL MPEAYVQRGD QASIVGGAIE FVKELEQQLQ 120
SLEAQKRTLA HHHQHYKAKP DAAASTPTTC VVESATTTTT TSNCSSSVAE DAHSVDAPPF 180
ARFFMYPQYV WCHQSPRELP AEDGGGRAGV ADIEVSLVET HASVRVMAPR RPAQLLRMVA 240
GLQALRLPVL HLTVTTLDTL ALYSLSVKLD ASPDLSMSLA AVSASTARQS GHCAERIVIE 300
IGMEKWDREK ATPRPQAMYM LLCLLPSPCV ILATVSSGHR TCTQARSGCQ LFHLCLPQVE 360
EGCGLPTADD IAAAVHHVLC IIDADAVAQE MLALGAVGH
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 65 | 76 | RMTHIAVERNRR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP094713 | 2e-91 | FP094713.1 Phyllostachys edulis cDNA clone: bphyst031k14, full insert sequence. |
