PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00955.1.g00090.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 389aa MW: 42896 Da PI: 7.6764

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00955.1.g00090.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.2	3.2e-12	114	146	2	34
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 ++lk rr+++NReAAr+sR+RKka+i++Le Zpz_sc00955.1.g00090.1.sm.mkhc 114 PQLKTIRRLAQNREAARKSRLRKKAYIQQLESS 146 789***************************963 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.0E-6	113	176	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.9E-9	114	146	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.714	115	159	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.46E-7	117	152	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.4E-8	117	158	No hit	No description
PROSITE pattern	PS00036	0	120	135	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.6E-28	197	270	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence Send to blast
MGETSSSTSH PRQDSCVLGS YGFHGAMGNN SAPPASFFLS RCRYSGCSCN GYSEAASYTG 60 HLPILAHEAG SNVLTADSTD SASSSKNTSN HSPDQHGPAT NMASQFDQAS HQQPQLKTIR 120 RLAQNREAAR KSRLRKKAYI QQLESSKVKL AQMEQDIQRA RAQGLLLGGA PGANTSSGAA 180 MFDLEYARWL EDYGRRMAEL HGALHAHLPD GELRAIVDDT LTHHDELFRL KAQAARSDVF 240 HLITGVWVSP AERCYLWMGG FRPSDLLKTL LPQLDPLTEQ QVVGICNLQQ SSQQAEEALS 300 QGLEQLHQSL ASTMAGGSVT DDPNTSFMSQ MALALNKLSN LEGFVLQADN LRQQTLHQMH 360 RILTVRQDTG YRRRQLRRVE HVLSYAQCY

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence Send to blast

MGETSSSTSH PRQDSCVLGS YGFHGAMGNN SAPPASFFLS RCRYSGCSCN GYSEAASYTG  60
HLPILAHEAG SNVLTADSTD SASSSKNTSN HSPDQHGPAT NMASQFDQAS HQQPQLKTIR  120
RLAQNREAAR KSRLRKKAYI QQLESSKVKL AQMEQDIQRA RAQGLLLGGA PGANTSSGAA  180
MFDLEYARWL EDYGRRMAEL HGALHAHLPD GELRAIVDDT LTHHDELFRL KAQAARSDVF  240
HLITGVWVSP AERCYLWMGG FRPSDLLKTL LPQLDPLTEQ QVVGICNLQQ SSQQAEEALS  300
QGLEQLHQSL ASTMAGGSVT DDPNTSFMSQ MALALNKLSN LEGFVLQADN LRQQTLHQMH  360
RILTVRQDTG YRRRQLRRVE HVLSYAQCY

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00955.1.g00090.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025828229.1	1e-176	transcription factor TGAL4-like isoform X1
Refseq	XP_025828230.1	1e-176	transcription factor TGAL4-like isoform X2
Swissprot	Q53Q70	1e-152	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A3L6PJL3	1e-175	A0A3L6PJL3_PANMI; Transcription factor HBP-1b(C38)-like
STRING	Si014861m	1e-169	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-93	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]