PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00931.1.g00050.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 744aa MW: 78261.1 Da PI: 10.4915

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00931.1.g00050.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.9	9.3e-38	453	510	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++ l+cprC+s+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk + Zpz_sc00931.1.g00050.1.am.mk 453 QAPLPCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRP 510 66789**************************************************875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.8E-31	455	509	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-25	456	507	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.357	456	510	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	458	494	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence Send to blast
MHGQTCVGRY EARHRPGPWQ GGSLLPAPVV RPSVRPSIFP ELRKRILRET DRRSMCSPLI 60 RVSACPDSDT EYYSRFPGRT KESANSAPML RGSKWVSAAF YPQVDTAAAC RRTRGPIEER 120 IPRPASSTDR LIAMTVAAAI PSPSLFPLSV RRFTALRLPA GPRALPLSSR AGVGPEQAVH 180 SAAAPCREGT SARLGLGWVG GLEQTRAQES GGRGAPAPHR ACLRGAPVAG MPHACFPRPA 240 SQPWESVIDD KHGADRPRPG KATRPDAVRP SFAGERIPNF LSAVYDMHAW PAEKAHPSTV 300 HTTRAGAGLK YAFFATSRQG PGCLLNAPAA ELDCHDHTLP VPGRPYPAAR FAGHAGRNVT 360 SPRRLSLRFP VSPSVTMIQE LLGGAAMDQL KSVNDGNPAS LPMLLHPIVA APSPTSSSST 420 SSRSSPQQPL PQRSTSATSS PQGQQQGQGA AEQAPLPCPR CNSSNTKFCY YNNYNLTQPR 480 HFCKTCRRYW TKGGALRNVP IGGGCRKPRP MPTPAAKPVM SCKGLGGGPQ LGLGVGMGMG 540 GASPVPWAPS QQTAAAQLMA LLSSARGMQG HGGSNVHRLL GLDSIGHLPL HVLPGTGNAT 600 GAPASLWPPS APRQVPATPA NMDSQLGMGP LGHNDVLSNL GLKLPPSSQS PAPNYYNDQL 660 HAVVSNAGRA REYDASATSL PCTTTVTSLP PAVSSISAAL SGATAGQLDL LPVSLTAPEM 720 QYWTGPAAMP VAWPDLPTPN GAFP

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence Send to blast

MHGQTCVGRY EARHRPGPWQ GGSLLPAPVV RPSVRPSIFP ELRKRILRET DRRSMCSPLI  60
RVSACPDSDT EYYSRFPGRT KESANSAPML RGSKWVSAAF YPQVDTAAAC RRTRGPIEER  120
IPRPASSTDR LIAMTVAAAI PSPSLFPLSV RRFTALRLPA GPRALPLSSR AGVGPEQAVH  180
SAAAPCREGT SARLGLGWVG GLEQTRAQES GGRGAPAPHR ACLRGAPVAG MPHACFPRPA  240
SQPWESVIDD KHGADRPRPG KATRPDAVRP SFAGERIPNF LSAVYDMHAW PAEKAHPSTV  300
HTTRAGAGLK YAFFATSRQG PGCLLNAPAA ELDCHDHTLP VPGRPYPAAR FAGHAGRNVT  360
SPRRLSLRFP VSPSVTMIQE LLGGAAMDQL KSVNDGNPAS LPMLLHPIVA APSPTSSSST  420
SSRSSPQQPL PQRSTSATSS PQGQQQGQGA AEQAPLPCPR CNSSNTKFCY YNNYNLTQPR  480
HFCKTCRRYW TKGGALRNVP IGGGCRKPRP MPTPAAKPVM SCKGLGGGPQ LGLGVGMGMG  540
GASPVPWAPS QQTAAAQLMA LLSSARGMQG HGGSNVHRLL GLDSIGHLPL HVLPGTGNAT  600
GAPASLWPPS APRQVPATPA NMDSQLGMGP LGHNDVLSNL GLKLPPSSQS PAPNYYNDQL  660
HAVVSNAGRA REYDASATSL PCTTTVTSLP PAVSSISAAL SGATAGQLDL LPVSLTAPEM  720
QYWTGPAAMP VAWPDLPTPN GAFP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00931.1.g00050.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A368SE80	1e-154	A0A368SE80_SETIT; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7710	31	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	4e-30	Dof family protein