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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zpz_sc00841.1.g00130.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
LBD |
| Protein Properties |
Length: 301aa MW: 32155.9 Da PI: 7.1774 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00841.1.g00130.1.sm.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 96.5 | 2.8e-30 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGa 76
+C++C+vlr++C ++C ++p++ pa+q++++ +++k++G++ +l+l++a+p++ r+++++sl+yeA+ r+ +P+yG+
Zpz_sc00841.1.g00130.1.sm.mk 4 SCNGCRVLRKGCGDSCSIRPCLqwiksPAAQSNATVFLAKFYGRAGLLNLVNAAPQHLRPAVFRSLLYEACGRIVNPIYGS 84
6******************************************************************************** PP
DUF260 77 vgvilklqqqleqlkaelallke 99
vg++++++++++q+++e++l ++
Zpz_sc00841.1.g00130.1.sm.mk 85 VGLLWSGNWNMCQAAVEAVLKGA 107
*****************998766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MRLSCNGCRV LRKGCGDSCS IRPCLQWIKS PAAQSNATVF LAKFYGRAGL LNLVNAAPQH 60
LRPAVFRSLL YEACGRIVNP IYGSVGLLWS GNWNMCQAAV EAVLKGAPIV KISSDEAAAD 120
TPSPAHLHKA AYDIRHVAAS SSSDKPGRLK KRTSASSAAT AAATTTTARS NKKSKKAAPD 180
DDHQQQQVST ASDHHHLHVV EPMDSDDAEA AGSHVSQAEQ STHSEREAEQ SIHNERESEQ 240
STHDEQQIEE KPQGQLGLDL TLGFVPIPAP CVPRPAPDAG DAGCSITGTG WTAHEPAFRF 300
L
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