PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00834.1.g00040.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 372aa    MW: 38534.4 Da    PI: 6.3252
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00834.1.g00040.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_175.76e-24256318163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     e+elkrerrkq+NRe+ArrsR+RK++e+eeL +kv+eL++eN aLk el++lkk ++ +++e+
  Zpz_sc00834.1.g00040.1.sm.mkhc 256 ERELKRERRKQSNRESARRSRLRKQQECEELGRKVAELTTENNALKAELDNLKKACQDMEAEN 318
                                     89*********************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165964.4E-8123233No hitNo description
Gene3DG3DSA:1.20.5.1703.8E-17253315No hitNo description
PfamPF001703.3E-21256318IPR004827Basic-leucine zipper domain
SMARTSM003385.2E-21256320IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.047258321IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.56E-11259314No hitNo description
CDDcd147021.09E-20261312No hitNo description
PROSITE patternPS000360263278IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MASSSDEQPK PPEPPAAAGP AVVAAAPQTH AEWAASLQAY YAAAGHPYAW PAQHLMAAAA  60
AGATYGAPVP FPVYHPGAAA AYYAHASMAA GVPYPTTEAA AAEAAAVAEG KGKGKGGGTS  120
PEKGSSGAPS GEDASQSGES GSDESSDTRD DDTDHKDSSA PKKRKSGNTS AEGEPSQAAV  180
VCYPAIESPF PMKGRSASKL PVSAPGRAAL PNATPNLSIG MDLWSTSPAL AVPAVQGEAS  240
PGLALARRDG AAPLDERELK RERRKQSNRE SARRSRLRKQ QECEELGRKV AELTTENNAL  300
KAELDNLKKA CQDMEAENSR LMGPSVTTTL GMSIEVPKSK QHDDEGLLRN NTNNNSNGNY  360
VGGSHKQEAN TR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1272278RRSRLRK
2272279RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00834.1.g00040.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001105491.11e-179maize Em binding protein-1a
SwissprotP250323e-61EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A3B6AWS50.0A0A3B6AWS5_WHEAT; Uncharacterized protein
TrEMBLA0A446KY900.0A0A446KY90_TRITD; Uncharacterized protein
STRINGPavir.Ba03287.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.18e-21basic region/leucine zipper transcription factor 16